Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g3294 ATGTTGGCTATGGAGAAAGATTTTGATTCTAAGTTGAAGATTAAGGAGAATTCGTCTGCTGATGGGAATGTGCAGAGATCTAAGAGCTTTGCCTTCAGAGCCCCTCAGGAGAATTTCACCATACAGGATTTTGAATTGGGAAAGATCTATGGTGTTGGCTCTTATTCTAAGGTTGTGAGGGCAAAGAAGAAGGACACAGGAGTTGTGTATGCATTGAAAATCATGGATAAAAAATTTATTACTAAAGAGAACAAAACAGCTTATGTGAAGTTGGAGCGCATAGTGCTTGATCAATTGGACCATCCTGGCATTGTGCGCCTATTTTTCACATTTCAAGACACATTTTCCATTTACATGGCACTTGAGTCCTGTGAAGGTGGAGAACTTTTTGATCAAATAACCCGGAAAGGTCGTCTATCTGAGGATGAAGCACGGTTCTATGCAGCTGAAGTTGTGGATGCTCTTGAATATATACATAGTTTGGGATTGATACATCGTGATATTAAGCCTGAGAACTTGTTACTCACGGCTGAAGGACATATTAAAATAGCCGATTTTGGGAGTGTGAAGCCTATGCAGGACAGCTGCATTACAGTCCTTCCAAATGCTTCAGCATCAGATGACAAAGCCTGCACATTTGTGGGGACAGCTGCTTATGTCCCTCCAGAGGTTCTTAATTCTTCTCCAGCAACTTTTGGAAATGACCTCTGGGCTCTTGGTTGCACTTTATATCAAATGCTTTCTGGAACATCTCCATTTAAAGATGCTAGTGAATGGCTTATTTTCCAAAGAATTATAGCCAGAGATCTTCGATTTCCAGATTTCTTTTCTGAGCAAGCAATTGACCTCATTGACAGTTTACTGGATTTAAATCCAATTAGGAGACCAGGTGCTGGACCTGATGGTTATGCTGTTTTGAAAAAGCATCCCTTTTTCAAGGGAGTAGACTGGAAAAACATAAGGGATCAAAACCCTCCAAAACTTGCTCCAGAAGCAGGGGGTCATTCTCCTGAGCATCATGATTCACCATTTAATCCTAAGGATAGTTCTGTTAAACCTGATGGAAACACCAGTGCTACTTCTTCTGATGGGAATGCTCATGTGACCAGGCTAGCTTCAATTGATTCTTTCGATTCAAAATGGCAACAATTCTTGGAACCTGGGGAATCTGTTATTATGATCTCAAATGTAAAGAAATTACAGAAACTAACTAGTAAGAAGGTGCAGCTTATCCTTACAAACAAGCCAAAGTTGATCTACGTTGACCCATCAAAACTAATTGTCAAGGGAAATATGTTATGGTCTGATAATCCAAGTGAACTTTCTGTCCAAGTGATTAATTCTTCACATTTTAAGATTTGCACACCAAAGAAAGTAATGTCATTGGAGGATGCAAAACAAAGAGCATGGCAATGGAAGAAGGCAATTGAAGGGCTTCAAAACCGATGA 1449 0.3996 MLAMEKDFDSKLKIKENSSADGNVQRSKSFAFRAPQENFTIQDFELGKIYGVGSYSKVVRAKKKDTGVVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGIVRLFFTFQDTFSIYMALESCEGGELFDQITRKGRLSEDEARFYAAEVVDALEYIHSLGLIHRDIKPENLLLTAEGHIKIADFGSVKPMQDSCITVLPNASASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDASEWLIFQRIIARDLRFPDFFSEQAIDLIDSLLDLNPIRRPGAGPDGYAVLKKHPFFKGVDWKNIRDQNPPKLAPEAGGHSPEHHDSPFNPKDSSVKPDGNTSATSSDGNAHVTRLASIDSFDSKWQQFLEPGESVIMISNVKKLQKLTSKKVQLILTNKPKLIYVDPSKLIVKGNMLWSDNPSELSVQVINSSHFKICTPKKVMSLEDAKQRAWQWKKAIEGLQNR 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g3294 482 ProSitePatterns Serine/Threonine protein kinases active-site signature. 163 175 IPR008271 GO:0004672|GO:0006468
Mibi02g3294 482 FunFam 3-phosphoinositide-dependent protein kinase 2-like 42 127 - -
Mibi02g3294 482 SUPERFAMILY PH domain-like 306 481 - -
Mibi02g3294 482 MobiDBLite consensus disorder prediction 317 365 - -
Mibi02g3294 482 Pfam Protein kinase domain 46 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g3294 482 FunFam 3-phosphoinositide-dependent protein kinase 1 353 482 - -
Mibi02g3294 482 ProSiteProfiles Protein kinase domain profile. 44 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g3294 482 CDD STKc_PDK1 42 312 IPR039046 GO:0004674
Mibi02g3294 482 Gene3D - 352 482 IPR011993 -
Mibi02g3294 482 Gene3D Phosphorylase Kinase; domain 1 42 127 - -
Mibi02g3294 482 MobiDBLite consensus disorder prediction 349 365 - -
Mibi02g3294 482 Gene3D Transferase(Phosphotransferase) domain 1 128 331 - -
Mibi02g3294 482 Coils Coil 462 482 - -
Mibi02g3294 482 Pfam PH domain 379 481 IPR033931 -
Mibi02g3294 482 PANTHER SERINE/THREONINE-PROTEIN KINASE 27 339 - -
Mibi02g3294 482 FunFam 3-phosphoinositide-dependent protein kinase 2-like 128 327 - -
Mibi02g3294 482 SMART serkin_6 44 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g3294 482 MobiDBLite consensus disorder prediction 333 347 - -
Mibi02g3294 482 SUPERFAMILY Protein kinase-like (PK-like) 28 329 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g3294 Mibi-ChrMibi02 58550075 58556345 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g3294 1 482 AGC Kinase Gene Family AT3G10540 80.368 0.0 797
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_PDK1 Mibi02g3294 Pkinase 2.1e-63 CL0016