Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g3277 ATGTCATCATCTGTAGAGGAAGTTCTTTGGTCTTCTACCATTGAAGAAGAATCAAGCAAATCATCTCTTGCTTCATTATTTGATGAAAGGAGTGGCTATGATTCAAGAACTGGGATATATCATTCTCTTTCTAAGCTTACTGCTAAGTATGAAATCCCAACAAGGCCTGACCTTGATACTGCAACTCTTGTTTTATCACACTTCCCTCACGCACACCACCTTGCTGCTAAAAAGCCTGCCTTCATAGATTCTTCAACTAACCAATCTATAAGCTATGGTGAACTTCAAAGCTCTATTCATTCCCTTGCTTTGGGTTTATACCACGGAATTGGTATCCGAAAAGGCGATGTGGTGTTTGTTCTGTCACCAAATTCAATTTCTTACCCAATTATATGCCTTGCTGTGTTGTCAATAGGAGCCATTCTTACCACAGCAAATCCTCTCAACACAGCTTCAGAAATAGCCAAGCAAGTGAAAGATTCAGGTGCTAAACTCGCAATTTCAGCACCTGAGGAGATGAAGAAGCTTTTACCAACTGGGGTTCCTATAATTCTCACAACTCGTCAATCTGATGGCCAACTGGTTTCAGTTGAAGAGTTAATTGAAGGTTGTTCTGGTAATAATCCAAGAGAGCTTCTTCCCCAAGTTCAGTTTTCTCAATCAGATACTGCAGCTATTTTGTACTCTTCAGGAACCACTGGGATGAGCAAAGGTGTGGTTTTGACACACGCTAATATCATATCCATCATAAGTTTACTGGCATGGTCTGCTGATGTATCTTCATCCCAGAATGATGTCTTTTTGGGGTTCATCCCAATATTTCACATCTATGGCTTGATGTTCTTTGGATTGGGATTGTTGTGTAAGGGAGTTACATCAGTAATTATGCAGAAATTTGACTTCAAGGAAATGCTTTTTGCAATTCAGAAGTATAGAGTCAATAATTTACCAGCAGTGCCTCCTGTGATTCTTGCTCTTGTGAAATATGGAAGCAAGGCTGGAGTTGACTTGTCAAGCCTTAGGAAAGTTGGTTCAGGTGCTGCACCTTTGAGCAAGGAACTTAGTGAGGAATTTAGAAAGATGTTTCCTTGGGTTGAGCTAAGGCAAGGCTATGGACTAACAGAAAGTTGTGGTGGAGCAACCTTTTTCGTGTTCAATAAGGATGCTAAAGCTCGCTCTGGCTCGTGTGGGAGGCTTCTTCCAACTTTCTGTGCAAAAATTGTGGATGTTGAGACAGGGAAGGCTTTGGCTCCGGGGAAGGAAGGAGAGTTATGGCTTAAGAGTCCTACAATAATGAAAGAGTATCTGGGGAATATGGAAGCAACAGCTGCTACACTTGATTCAGAAGGGTGGATGAAAACAGGTGATCTTGCTTATGTTGATGAGGATGGATTTGTGTATGTCCTTGAAAGAATAAAGGAGCTGATCAAACACAATGGGTATCAGGTTGCTCCTGCAGAACTGGAAGCTCTGCTGCTCAGCCATCCCAATATTCTTGATGCAGCTGTTATACCGGTTGAAGATGTAGAATCTGGACAGATACCAATGGCGTATGTGGTGAAAGCAGCTGGTTCTGAAATCACAGAAGACCAAGTCATTCAATTTGTCGCCAGCCAAGTGGCTCCATACAAGAAAATAAGAATTGTAAGCTTCATTGATGCTATTCCAAGGTCAGCTGCTGGTAAAATCTTGCGCAAGGATCTTGTTTCACAAAGCAAAGCTAAACTCGTTTCCAAGTTATGA 1743 0.4165 MSSSVEEVLWSSTIEEESSKSSLASLFDERSGYDSRTGIYHSLSKLTAKYEIPTRPDLDTATLVLSHFPHAHHLAAKKPAFIDSSTNQSISYGELQSSIHSLALGLYHGIGIRKGDVVFVLSPNSISYPIICLAVLSIGAILTTANPLNTASEIAKQVKDSGAKLAISAPEEMKKLLPTGVPIILTTRQSDGQLVSVEELIEGCSGNNPRELLPQVQFSQSDTAAILYSSGTTGMSKGVVLTHANIISIISLLAWSADVSSSQNDVFLGFIPIFHIYGLMFFGLGLLCKGVTSVIMQKFDFKEMLFAIQKYRVNNLPAVPPVILALVKYGSKAGVDLSSLRKVGSGAAPLSKELSEEFRKMFPWVELRQGYGLTESCGGATFFVFNKDAKARSGSCGRLLPTFCAKIVDVETGKALAPGKEGELWLKSPTIMKEYLGNMEATAATLDSEGWMKTGDLAYVDEDGFVYVLERIKELIKHNGYQVAPAELEALLLSHPNILDAAVIPVEDVESGQIPMAYVVKAAGSEITEDQVIQFVASQVAPYKKIRIVSFIDAIPRSAAGKILRKDLVSQSKAKLVSKL 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g3277 580 Gene3D - 474 577 IPR045851 -
Mibi02g3277 580 Pfam AMP-binding enzyme C-terminal domain 487 562 IPR025110 -
Mibi02g3277 580 FunFam 4-coumarate--CoA ligase 2 474 575 - -
Mibi02g3277 580 SUPERFAMILY Acetyl-CoA synthetase-like 63 571 - -
Mibi02g3277 580 CDD 4CL 52 568 - -
Mibi02g3277 580 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 34 570 - -
Mibi02g3277 580 Pfam AMP-binding enzyme 77 477 IPR000873 -
Mibi02g3277 580 ProSitePatterns Putative AMP-binding domain signature. 226 237 IPR020845 -
Mibi02g3277 580 Gene3D - 49 473 IPR042099 -
Mibi02g3277 580 FunFam Long-chain-fatty-acid--CoA ligase FadD 50 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g3277 Mibi-ChrMibi02 58252059 58255544 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g3277 34 576 Monolignol Biosynthesis Gene Families AT1G20500 44.604 1.27e-161 471