Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g3275 ATGGGAAGTGATTCTGCTACTTCTCTCGCCCCTGGATTCCGATTCCATCCCACCGATGAAGAGCTCGTTCGCTTCTACCTCAGGCGCAAGGTCTGCGGAAAACCCTTCCGGGTCGACCCGATTGCCTTCATCGACATCTACAAATCCGAACCCTGGGACCTCCCCTGTCATTCGAAGCTGAAAAGTAGGGACTTGGAATGGTACTTCTTTAGTGGGTTGGATAAGAAGTATGGGAATGGGTCGAAGACGAATAGGGCTACTGAGAAAGGGTATTGGAAGACTACTGGGAAGGATCGCCCTGTGAAACATAAGTCTCGAGTTGTTGGGATGAAGAAGACTCTGGTTTATCATCATGGTCGAGCTCCACGAGGGGATCGTACCAATTGGGTCATGCATGAGTACAGAATGACCGATGAGGAATTGGTGAAAGCAGGAATTGCTCAGGATGCTTTTGTGCTTTGTAGGGTTTTTCAGAAGAGTGGTACTGGGCCAAAGAATGGAGAGCAGTACGGTGCACCCTTTATAGAGGAGGAATGGGAAGAGGATGAGGTGACTCCTGTGTCAGGTGAAGGGGCTGTTACTGATGACGTTTTAATGGGCGATGATGTTGATGCTTTTTTTGAAACAAACGACCTTGAGCAGATCCTTGATACGGAGACAGTATCTGCTAGCGCTGCCCTTCCACTCAACATGTGTTATGGGGAGAGTAGCAGCTATCCTGAACCTGAGCATTCTCAGGAAACCACTGAAGAACAGAAGCCCTTGGTAAGCACTGGTGGAATTTGTGACCTTCAAGAGGATCGGCTCATGAATGTACCTGAGCAGTACACAGTGGATGGAAAAACATTGAAGGATGAATATGAAATGGGAGCAAGGCAAGACAGTAGTCTTCCTAATGTCGATCCTGCCTTTGATGATCTAAACTGGGATGGTTTCGATTTTCCTCAGATTGGTGATGGTTCATTCCTTGAAACCAATGATCTTCTGAATCCCCTCGAGGCAGATCTTGATGTTAAGGACATGCTGGATGAGTATCTTTACTGGGATGCTGATGATGATATTTCCAAGTTTACGTCTTTTGAGTCTCCGCAGATGAAGAGTGATGTAGAATCAGTTCCTGACCAAGGACTTCCTTTCATTCAGAATGTGGATGAGAAACCCAACATGGCTTGTGAGCAGAATTTTGATGATGCACCTTGTAGTGATGGAGCTTCCTCTTCTAAGCAGAATTCAGAATTGTCAAAATCAGTATTAGGAGATATGAATCCTCTGACGAAAAGGGTCAGTCGCTTTTTGGACAGCATCCCTGCTCCTCCTGCCTTTGGTTCAGAGCTTCCTCCCAAGGATATTGCTCTTCGGCTTCATTCTGCCGCCCAATCTTCTAATCATGTAACTGCAGGTATGATTAGAGTGACTAACATTACTCTTAGAGGTAACGGGATGGACTGGGCGCTTGGCAAGAACGGAGGGTTCAACTTCATGGTCTCTTCTGATTTTTCTCAACCTAGTAGTATTTCTGATGCATTGGTCCCGATCTCTGGCAAGAGTGCCTTTTTGGTGTCACATTGCTGGTTTTTCTTGATGCTCTTTTCGGTTCTTATTCTTTCACTGAGTTGCAAGATTGGGAGTTGCATGTATGCTGCTGGTAAATGA 1653 0.461 MGSDSATSLAPGFRFHPTDEELVRFYLRRKVCGKPFRVDPIAFIDIYKSEPWDLPCHSKLKSRDLEWYFFSGLDKKYGNGSKTNRATEKGYWKTTGKDRPVKHKSRVVGMKKTLVYHHGRAPRGDRTNWVMHEYRMTDEELVKAGIAQDAFVLCRVFQKSGTGPKNGEQYGAPFIEEEWEEDEVTPVSGEGAVTDDVLMGDDVDAFFETNDLEQILDTETVSASAALPLNMCYGESSSYPEPEHSQETTEEQKPLVSTGGICDLQEDRLMNVPEQYTVDGKTLKDEYEMGARQDSSLPNVDPAFDDLNWDGFDFPQIGDGSFLETNDLLNPLEADLDVKDMLDEYLYWDADDDISKFTSFESPQMKSDVESVPDQGLPFIQNVDEKPNMACEQNFDDAPCSDGASSSKQNSELSKSVLGDMNPLTKRVSRFLDSIPAPPAFGSELPPKDIALRLHSAAQSSNHVTAGMIRVTNITLRGNGMDWALGKNGGFNFMVSSDFSQPSSISDALVPISGKSAFLVSHCWFFLMLFSVLILSLSCKIGSCMYAAGK 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g3275 550 MobiDBLite consensus disorder prediction 391 418 - -
Mibi02g3275 550 Pfam No apical meristem (NAM) protein 11 136 IPR003441 GO:0003677|GO:0006355
Mibi02g3275 550 ProSiteProfiles NAC domain profile. 9 159 IPR003441 GO:0003677|GO:0006355
Mibi02g3275 550 SUPERFAMILY NAC domain 7 159 IPR036093 GO:0003677|GO:0006355
Mibi02g3275 550 MobiDBLite consensus disorder prediction 234 254 - -
Mibi02g3275 550 MobiDBLite consensus disorder prediction 399 418 - -
Mibi02g3275 550 FunFam Nac domain-containing protein 86 18 162 - -
Mibi02g3275 550 Gene3D NAC domain 18 162 IPR036093 GO:0003677|GO:0006355
Mibi02g3275 550 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 8 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g3275 Mibi-ChrMibi02 58232249 58235437 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g3275 1 547 NAC Transcription Factor Family AT5G04410 44.027 4.92e-141 417
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mibi02g3275 NAM 2.7e-35 No_clan