Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g3273 ATGGGTCGCGAGACTTTGCCAGTTCCAGCTCCTCCAGCCCCAGTAGTGTCTGCGCCGAATCCAGCATCACCTCCAGTAGTAGCACCTCAAGCTCCTCCTACATCACTCGCTCCTGGCTTTCGTTTCCACCCAACTGATGAGGAACTTGTTATTTACTACCTTAAGCGCAAAGTTTGTGGCAAAACCTTCCGATTTGACGCAATCTCTGAAGTGGATATTTACAGGAGTGAGCCTTGGGACCTAGCAGATAAGTCGAGGTTGAAGACAAGGGACCAAGAATGGTACTTTTTTAGTGCTTTGGATAAGAAATATGGTAATGGAGGGAGGATGAACAGGGCTACGAGCAAAGGGTATTGGAAAGCCACTGGGAATGACCGACCAGTGAGGCACGAACAAAGGACCGTGGGGCTGAAGAAAACTTTGGTGTTTCATAGTGGGAGGGCTCCAGATGGTAAGCGTACCAATTGGGTCATGCATGAGTACAGGCTTGTTGAAGAAGAGCTTGAAAGAGCTGGAACTGGGTCCGCCCAGGATGCCTACGTTTTGTGTAGAGTATTTCACAAAAATAACATAGGACCTCCAAATGGTCAACGTTATGCACCTTTCATTGAGGAAGAATGGGATGATTCATCAGCAATGATTCCAGGGGCGGAGCCTGTTACCATCCGTCGACCTCTTGTTGAAGGCAATGGTCATGTTGGCTGTTTTGAAAGAACTCATGCTGTTCAGGATACGCATTCTGTCAATAAAGTTCCTCTTGATGTGAATAAGCTACCGATTGAAACTCAAAATCTTCTAGCAGTCTGCAAGAGGGAGAGCATGGCTGAGTATCCGTCACCCGAAAGGGATAATTCCAAGTCTTTGGATGAGTACCCATCACCACAAACCGACAATCCAAAGCCGTTCTCGCTAATATACAAAAGAAGGCGGCATAGCTTGAACTCTAATAACTCAAATGCTCCCGAGCATTCAGCCCGTAACAGCCAGGATCCATGCTCTTCGGTAATAACAACTGCCGCAACAACCACCACCACCACCACAACTACCAGCACTTCGTCGAGAAAACATTTTTTGTCTGCATTAGTGGAGTTTTCCCTCCTTGAATCTCTTGAACCTAAGGAAAGTCCTGCAACTCTGGTGCCAGAATTCGATCCCTCCTCTCTCGACTCGCCTCTGCCCCCGAGCTGCATGAAGTTCATCCAGCAGTTGCAGGATGAGGTTCGCAAGCTCTCGGTGGAGAGGGAGACGATGAAGTTTGAGATGATGAGTGCGCAGGCCATGATAAACATTCTGCAATCCCGTATCGACATGCTGACAAATGAGAACAAGGAGTTAAAGAGAGGCACTGATAATGATGCTTAG 1362 0.4772 MGRETLPVPAPPAPVVSAPNPASPPVVAPQAPPTSLAPGFRFHPTDEELVIYYLKRKVCGKTFRFDAISEVDIYRSEPWDLADKSRLKTRDQEWYFFSALDKKYGNGGRMNRATSKGYWKATGNDRPVRHEQRTVGLKKTLVFHSGRAPDGKRTNWVMHEYRLVEEELERAGTGSAQDAYVLCRVFHKNNIGPPNGQRYAPFIEEEWDDSSAMIPGAEPVTIRRPLVEGNGHVGCFERTHAVQDTHSVNKVPLDVNKLPIETQNLLAVCKRESMAEYPSPERDNSKSLDEYPSPQTDNPKPFSLIYKRRRHSLNSNNSNAPEHSARNSQDPCSSVITTAATTTTTTTTTSTSSRKHFLSALVEFSLLESLEPKESPATLVPEFDPSSLDSPLPPSCMKFIQQLQDEVRKLSVERETMKFEMMSAQAMINILQSRIDMLTNENKELKRGTDNDA 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g3273 453 FunFam Nac domain-containing protein 86 45 191 - -
Mibi02g3273 453 Pfam No apical meristem (NAM) protein 38 163 IPR003441 GO:0003677|GO:0006355
Mibi02g3273 453 Gene3D NAC domain 45 191 IPR036093 GO:0003677|GO:0006355
Mibi02g3273 453 Coils Coil 400 448 - -
Mibi02g3273 453 MobiDBLite consensus disorder prediction 273 333 - -
Mibi02g3273 453 SUPERFAMILY NAC domain 31 189 IPR036093 GO:0003677|GO:0006355
Mibi02g3273 453 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 35 319 - -
Mibi02g3273 453 MobiDBLite consensus disorder prediction 1 32 - -
Mibi02g3273 453 MobiDBLite consensus disorder prediction 309 333 - -
Mibi02g3273 453 ProSiteProfiles NAC domain profile. 36 188 IPR003441 GO:0003677|GO:0006355
Mibi02g3273 453 MobiDBLite consensus disorder prediction 7 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g3273 Mibi-ChrMibi02 58221685 58227828 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g3273 1 447 NAC Transcription Factor Family AT3G10480 44.444 2.13e-121 362
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mibi02g3273 NAM 6e-36 No_clan