Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g3249 ATGCATCTGTGTCAGATACTTGGTGTGTTAAATGCTTGGTGGAAGTGGATGAGTGTTTTATCTGTAGCTTTTCCTTCTCCCAGGTCTAAAGATCATCACTTTCGCATCACCATGTGGTTTCCTCACATGGCCTCTCAAGCTTTTTCCATATCTTGGAATCAATTACAGCAACCTGGCACGTTTAAAACCATGGTTCAAACCTCACGTATTATTCAGAATTTATCCACAATGTTTCCCCCTCAAAGTATTGAATTGCTCATATCACACATTATAAGTCATGCTAGAATTCTTCTATGGAGGTATCGTTTGACTTCTCTAAGTTTCCATTATTACATGGTTTATTTAGATGTGGATTTTTGTATTCCTGATAATTTCTGTGAAGGAGAAAGGAGATGGTGGGGTACAAAGGAGGATAGAATTATAGCATCATTCACTAAAATGAAAATAAATGATGATGATGATGATGGGAAAGAAGAATCATCATGTGCTATATGCTGGGAGAAATTTGAGGATAATGAACAAGTATTTGCAATTCCATGTCAGTGTCAGCATGCTTACCATAAGAATTGCATTCTCCCCTGGCTTCAGAATCGTCTTACCTGTCCATTGTGTCGCTCTAAAATAGTACCATCTAGCAAATGA 642 0.3769 MHLCQILGVLNAWWKWMSVLSVAFPSPRSKDHHFRITMWFPHMASQAFSISWNQLQQPGTFKTMVQTSRIIQNLSTMFPPQSIELLISHIISHARILLWRYRLTSLSFHYYMVYLDVDFCIPDNFCEGERRWWGTKEDRIIASFTKMKINDDDDDGKEESSCAICWEKFEDNEQVFAIPCQCQHAYHKNCILPWLQNRLTCPLCRSKIVPSSK 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g3249 213 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 129 211 IPR013083 -
Mibi02g3249 213 Pfam Ring finger domain 161 205 IPR001841 -
Mibi02g3249 213 SUPERFAMILY RING/U-box 146 210 - -
Mibi02g3249 213 SMART ring_2 162 204 IPR001841 -
Mibi02g3249 213 CDD RING-H2_PA-TM-RING 162 205 - -
Mibi02g3249 213 ProSitePatterns Zinc finger PHD-type signature. 162 204 IPR019786 -
Mibi02g3249 213 ProSiteProfiles Zinc finger RING-type profile. 162 205 IPR001841 -
Mibi02g3249 213 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 136 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g3249 Mibi-ChrMibi02 57834016 57835273 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g3249 131 208 C3H Transcription Factor Family AT3G30460 38.462 1.33e-11 59.3