Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g3239 ATGAGACACTGCAATGTGTCAAGAGACAAGCATGCCATGTGTCAATCAGAAAGCCTATCAGTGTCGGAAAGGCCTGAGTTAAAAATGGCAAACAAAACTCTGTGTGTGTGTCAAGCTTCTTTCATTCAGAGAGCTTCCATGGAGTTAGAAGTGAAGTTGGTAGGAAGCATCGACAATTGCTTCGTATCCCTTCCTCTTCCTTTTATCCAACTTCTCCATTCCACGCGCTCCACGCCACTCCCTCATATTCTCACTCTCGAGCTTCGCTCTCCCTCTGACGATCTCTGGGTCGTTGCTTGGTCCGGAGCTACCTCTTCTTCTAATGCCATAGAGGTTGCCCAACATTTCGCAGAATGCATTTCCTTGCCAGATCATGCTAGAGTTAAGGTAAAAGCTGCTTCTAATGTGTCACACGCTTCTCTAGTTACAATAGAACCCCATACAGAAGATGATTGGGAAATCTTGGAGCTGAACTCTGAGCAAGCTGAGGCGGCAATTTTAAACCAGGTCAGGATTGTCTATGAAGGAATGAGATTTCCTTTGTGGTTGCATGGTCACACAATGATTACATTCTATGTTGCTTCTGTTATTCCCAAGAAAGCGGTGGTGCAACTCATGCCAGGAACTGAAGTTGCGGTTGCCCCAAAAAGACGTAAAAGATTTTCAAATACACTTGCAGACTTACATCCAGATTCCAATGATAGAGAAAACACTATGAAGATGCTGCTCCGTATACAGGATCCAGAGAAGCTGTGTCACACAAGTGCTTGTGTCAAAGGTGTTGATCTTCACATGGAGCTTACTTCTGTTGCTTTTGTTCACCCTGAAACTAGCAAGCAGTTCTCGCACAATAGGCTCCAATTGGTCTCCATAGTTCCAAGAATGTCCAACAAGAAGGCTAATGGTACTTCCAGAATGAATATTATGAAAACAAAAGGCAGTTCAACTACTAGGGAAGTTGACTCTGGAAGTTTAACTGATGAGAAATGGTGTCAACAACCAATTGTTTATCTTCTTCCTTCAGAGTCAGTGGCCAAGGGGCATGTGATGGTTGCTAAATCTCTTCGTCATTATTTAAGAGTTGGCCTGCATTCATGGGTTTATCTGAAGGCATGTGATGTTAATTTGGAAAAATCTTTTCCCTCTTTCTCGCTTTCTCCTTGCCGCTTCAGAATGTTAAGGCCGGATAATGATGATGATAATTATATAGATAAGAACAAGCTCACAAGGACTGCATCGGGTGTCTTTGGGGATCTTGTGGATTGGTCAATCCACAATGGAGTTATTACCGTTCTTTCGGATGAATCCCATTCTGAAGCAGATGAAGAGGTTGCTAATCAATCTGAGAATCAAAACGGACTACAGCATCTTCTAAGACTATGGTGTATTGCACAACTTGATGCAGTTGCTTCCTTTACTGGCACGGAGGTTAATGCACTGGCATTGGGTTGTAAAACCTTACTTCATTTTGAAGTGAGTTACATAAAGCATGGGACTAATGGAAAGATTCAGTTAGCTTCTGATTCATCAGAAAACAGAAACAAGACAGCTGAGATCTTGTTTTTATTGACTGTTGGTGAAGATTCTTTGCATCACGAAAAAGTTACTGCATATGAAATTGCACTTGGCGAAAGAAGCAAAATGGGTGATCCAGCAGATCAACAGCTGTTTAAAAGGCTGAAGTTCGCTGATCCCGTCTCTATCCAATCTATAGAAGAGAAAATATCTGAAGAACATAATACTTCAGAAGTAACTAGCCTTGACTGGATGGAGGCAGCTGCTTCTGATGTTATCAATAGGATGACATTATTGTTATCTTCTGCTTCTGGCATGTGCTTTGATTCAAACAAATTACCACTGGCAGGGCATGTTCTTATTTATGGTCCTTCAGGCTCTGGCAAAACTTTACTAGCAAGGGCTGTTGCAAAATACTTTGAGAAACATGAAGACATCTTAGCTCACATAATTTTTGTTTCTTGTTCAAAACTAGCTTTGGAGAATGTCCCAAAAATTCGGAAAGAAGTTTCTAACAACATTATGGAAGCTTTAGATCATGCACCTTCTATTGTCATCTTTGATGATCTCGATAGCATAGTTTCCACCTCTGACTCGGAAGGGACTCAACCTTCAATGACTGCTGATCGACTGACAGGTTTTCTGGTTGACATTATGGATGAATGTCGGGAGAAAAGGCAAAAATCATGTGGATTTGGACCAATAGCCTTCATAGCTTCTGTACAAGCTCTCGAGAAGATACCACAGTCTTCAAGCTCTTCAGGGAGGTTTGACTTTCACATTCAGCTGCCAACTCCTGCAGCTTCAGAGCGGGGTGCTATGTTGAGGCATGAAATAAAAAGGCGTAACTTGCAATGTGCTGATGACATCCTATTTGATGTAGCTGTCAAATGTGATGGCTATGATGGTTATGATCTGGAAGTATTGGTTGACAGAGCTGTCCATGCTGCTGTATCTCGTTTTCTCCCATCAAATGCTGCTCTTAATGAGCATGAGGGTCCTGCTTTACTTATGGAAGATTTCTCTCAGGCAATGCATGATTTTCTTCCAGTTGCAATGAGAGACATTACAAAAGCTGCTTCTGATGGTGGGCGCTCTGGATGGGATGATGTAGGAGGTCTTGGTGACATTCAAAACACTATTAAGGAGATGATAGAGCTGCCTTCTAAGTTTCCAAAAACTTTTGCGCAAGCTCCTCTGAGGTTAAGATCAAATGTCCTTTTATATGGGCCTCCTGGCTGTGGCAAAACTCACATAGTTGGTGCTGCCGCCGCCGCTTGTTCTCTACGTTTCATATCTGTAAAAGGGCCAGAACTGTTGAACAAATACATTGGTGCTTCTGAACAAGCTGTTAGGGATATATTCTCTAAAGCAGCTGCTGCAGCACCATGTCTACTCTTTTTTGACGAATTTGATTCTATTGCCCCCAAGAGAGGACATGACAATACTGGAGTCACTGATCGTGTTGTGAATCAGTTTCTGACTGAGTTAGATGGTGTTGAGATTTTAACCGGTGTATTTGTGTTTGCTGCTACCAGTAGGCCGGATTTGCTTGATGCAGCACTTTTGAGACCAGGCAGATTAGATCGACTTCTGTTCTGCGACTTTCCATCTCAGCAGGAAAGGTTTGAAATTCTTACAGTACTTTCTAGAAAGTTGCCCCTGGCCAGTGATGTAGATCTGGCTGCAGTAGCTCATATGACTGAGGGATTTAGTGGAGCTGATCTCCAAGCTCTTCTTTCAGACGCACAACTTGCAGCAGTTCATGAAGTCTTGGACAATACAAACACCTCCGGGGCCGAGAAAAGACCGGTTATTACAGATGCACTTCTTAAGGTTACAGCCTCCATGGTTAGACCATCTGTCTCAGATGAAGAGAAAAGAAGACTTTACAGTATTTACAGCCAGTTCCTTGATTCAAAGAGATCTGTTGCTTCCCAGTCAAGAGATGCAAAAGGCAAGCGGGCAACTCTAGCGTGA 3495 0.4266 MRHCNVSRDKHAMCQSESLSVSERPELKMANKTLCVCQASFIQRASMELEVKLVGSIDNCFVSLPLPFIQLLHSTRSTPLPHILTLELRSPSDDLWVVAWSGATSSSNAIEVAQHFAECISLPDHARVKVKAASNVSHASLVTIEPHTEDDWEILELNSEQAEAAILNQVRIVYEGMRFPLWLHGHTMITFYVASVIPKKAVVQLMPGTEVAVAPKRRKRFSNTLADLHPDSNDRENTMKMLLRIQDPEKLCHTSACVKGVDLHMELTSVAFVHPETSKQFSHNRLQLVSIVPRMSNKKANGTSRMNIMKTKGSSTTREVDSGSLTDEKWCQQPIVYLLPSESVAKGHVMVAKSLRHYLRVGLHSWVYLKACDVNLEKSFPSFSLSPCRFRMLRPDNDDDNYIDKNKLTRTASGVFGDLVDWSIHNGVITVLSDESHSEADEEVANQSENQNGLQHLLRLWCIAQLDAVASFTGTEVNALALGCKTLLHFEVSYIKHGTNGKIQLASDSSENRNKTAEILFLLTVGEDSLHHEKVTAYEIALGERSKMGDPADQQLFKRLKFADPVSIQSIEEKISEEHNTSEVTSLDWMEAAASDVINRMTLLLSSASGMCFDSNKLPLAGHVLIYGPSGSGKTLLARAVAKYFEKHEDILAHIIFVSCSKLALENVPKIRKEVSNNIMEALDHAPSIVIFDDLDSIVSTSDSEGTQPSMTADRLTGFLVDIMDECREKRQKSCGFGPIAFIASVQALEKIPQSSSSSGRFDFHIQLPTPAASERGAMLRHEIKRRNLQCADDILFDVAVKCDGYDGYDLEVLVDRAVHAAVSRFLPSNAALNEHEGPALLMEDFSQAMHDFLPVAMRDITKAASDGGRSGWDDVGGLGDIQNTIKEMIELPSKFPKTFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAAAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEILTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSQQERFEILTVLSRKLPLASDVDLAAVAHMTEGFSGADLQALLSDAQLAAVHEVLDNTNTSGAEKRPVITDALLKVTASMVRPSVSDEEKRRLYSIYSQFLDSKRSVASQSRDAKGKRATLA 1164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g3239 1164 CDD AAA 903 1040 - -
Mibi02g3239 1164 SMART AAA_5 620 772 IPR003593 -
Mibi02g3239 1164 SMART AAA_5 907 1043 IPR003593 -
Mibi02g3239 1164 SUPERFAMILY Cdc48 domain 2-like 138 215 IPR029067 -
Mibi02g3239 1164 Pfam ATPase family associated with various cellular activities (AAA) 911 1038 IPR003959 GO:0005524|GO:0016887
Mibi02g3239 1164 Pfam ATPase family associated with various cellular activities (AAA) 624 769 IPR003959 GO:0005524|GO:0016887
Mibi02g3239 1164 Gene3D - 1042 1121 - -
Mibi02g3239 1164 Gene3D - 569 771 IPR027417 -
Mibi02g3239 1164 FunFam PeRoXisome assembly factor 1042 1121 - -
Mibi02g3239 1164 FunFam Nuclear valosin-containing protein-like 869 1048 - -
Mibi02g3239 1164 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 873 1121 IPR027417 -
Mibi02g3239 1164 Gene3D - 772 851 - -
Mibi02g3239 1164 Gene3D - 136 216 - -
Mibi02g3239 1164 ProSitePatterns AAA-protein family signature. 1011 1029 IPR003960 GO:0005524|GO:0016887
Mibi02g3239 1164 Pfam Peroxisome biogenesis factor 1, N-terminal 142 215 IPR015342 GO:0005524|GO:0005777|GO:0007031
Mibi02g3239 1164 Gene3D - 872 1133 IPR027417 -
Mibi02g3239 1164 SUPERFAMILY ADC-like 56 132 IPR009010 -
Mibi02g3239 1164 PANTHER AAA-FAMILY ATPASE 261 1138 - -
Mibi02g3239 1164 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 610 851 IPR027417 -
Mibi02g3239 1164 FunFam Peroxisome biogenesis protein 1 577 771 - -
Mibi02g3239 1164 CDD AAA 617 769 - -
Mibi02g3239 1164 FunFam Peroxisome biogenesis factor 1 137 216 - -
Mibi02g3239 1164 Pfam AAA+ lid domain 1063 1102 IPR041569 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g3239 Mibi-ChrMibi02 57671290 57694093 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g3239 619 827 Calmodulin-binding Proteins AT3G56690 30.952 7.54e-13 71.2