Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g3227 ATGTGCAAGACCAAAAGCAGCACAGACGTGATCCAACCTACCAGACCCCGTCGATCTCGCACCTTCCAATCCTCCTCCTCCTCTTCTCCTCCCACCGCCGCCGCCGCCGCCAACCTCCGACCTTCCTCCTCCTCCTTCAACCTCTCCACCGAATCCACCAGCCACTTCTACAACAACAACAACAAGGACTGGTCCAAAACCTCCTCCGTCTCCAGTCATTCCTCCCTCTCTAGCCTCAAAGACTCTCTCCCTGAAAACGCTCTCATCTACGAGTTCTCTGAAATTTCCTCCGCCACCAGAAACTTCAAATCCGAGAAATTCTCATCCTCCTCTTCCTCCTCCTCTTGGCGCTGTTCCATTCGCAACAAGGACGTCCTCGTCTTCCAGCGCAAGTTTCGCCGTCAAATGTCCTTACCTGAGCTACGAGATCGGCTCTCCGTCATCTGCCGCAGCCACCACAGTAGCTTAATCAAACTCCTCGGCGCATCCGTCTCCGGTAATTACATCTACCTCGTCTATGATTACGTTCGCGGTGTTAATCTCTCTGATTGCCTTCGAAATCGCTTAAACCCTAGCTTCACTGATTTATCCACCTGGCTTTCACGTATGCAAATCGCCACCGATCTCGCTCACGGCCTCGATTACATGCACAATTTCTCAGGCCTCAACTCGGATTTCGTCCACAACCATATCAAATCCTCGAGCATCGTCGTCTCGGAGGACACTCTCAACGCGAGGATCTGCCATTTCGGAACCTCCGAACTCTGCGGTGAGATCGTTACATCGGAAACGACACCGTCAGGATCGAAATTACGGAGGTCCGGCAGCGGTACGGTGAGGCTGGAAGGGACGAGAGGTTATATGTCGCCGGAGTATCAGGCGACGGGGGTGGCGACGCAGAAATCGGACGTGTATGCGTTCGGAGTGGTGGTTTTGGAGCTGGTGAGCGGTCAGGAGGCGTTGAAGTATGAATTTGACGGCGGCGGAGACGGCGGTTATAGGAGGGTGAGTGTGGTGGAGGCGGCGAGGGTGGCGATGGCGGAGGAAGGAGGGGCGAGGAGGTGGGTGGATAGGAGGATGAGGGATTCGTTTCCGGTGGAGGTGGCGGCGGAGATGATTCGGGTCGGGTTGGATTGTGTGGAGGAGGATCCGAATGAGAGGCCGGATATGGGCCGGGTTGCGGTTTCGGTGTCCAAGTTGTATTTGGATTCCAAGAAGTGGGCTGAGAGTATGGGAGCGGCTATTGACTTGACTGTCTCACTTGCGCCGAGGTGA 1275 0.5529 MCKTKSSTDVIQPTRPRRSRTFQSSSSSSPPTAAAAANLRPSSSSFNLSTESTSHFYNNNNKDWSKTSSVSSHSSLSSLKDSLPENALIYEFSEISSATRNFKSEKFSSSSSSSSWRCSIRNKDVLVFQRKFRRQMSLPELRDRLSVICRSHHSSLIKLLGASVSGNYIYLVYDYVRGVNLSDCLRNRLNPSFTDLSTWLSRMQIATDLAHGLDYMHNFSGLNSDFVHNHIKSSSIVVSEDTLNARICHFGTSELCGEIVTSETTPSGSKLRRSGSGTVRLEGTRGYMSPEYQATGVATQKSDVYAFGVVVLELVSGQEALKYEFDGGGDGGYRRVSVVEAARVAMAEEGGARRWVDRRMRDSFPVEVAAEMIRVGLDCVEEDPNERPDMGRVAVSVSKLYLDSKKWAESMGAAIDLTVSLAPR 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g3227 424 SUPERFAMILY Protein kinase-like (PK-like) 125 397 IPR011009 -
Mibi02g3227 424 PANTHER OS09G0572100 PROTEIN 1 424 - -
Mibi02g3227 424 MobiDBLite consensus disorder prediction 1 46 - -
Mibi02g3227 424 Gene3D Phosphorylase Kinase; domain 1 60 175 - -
Mibi02g3227 424 Gene3D Transferase(Phosphotransferase) domain 1 178 415 - -
Mibi02g3227 424 ProSiteProfiles Protein kinase domain profile. 101 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g3227 424 Pfam Protein tyrosine and serine/threonine kinase 135 393 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g3227 Mibi-ChrMibi02 57434134 57435408 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g3227 85 413 Receptor kinase-like Gene Family AT1G51940 30.178 2.87e-44 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Mibi02g3227 PK_Tyr_Ser-Thr 9.2e-23 CL0016