Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g3225 ATGGGTAATGTTGAAATTCCCAATTGGCTAAAAGACTTGCCTTTGGCTCCCGAATTTCGCCCAACTGATACTGAATTCGCCGACCCAATTGCTTACATTTCAAAGATTGAGAAAGAAGCTGGCGCTTTTGGGATTTGTAAGATTATCCCTCCATTGCCCAAGCCTTCTAAGAGATATGTGTTCTCTAATTTGAACAAGTCTCTTTTGAAGAGCCCGGAATTGGGTTCGGATAGTAATTCGGTTGGGGTTAGCAATCCTTTGAAAATTGTTTCTGGCGATAATGGTGGTAGTGATGGGGAGGCACGGGCTGTGTTTACCACAAGGCATCAAGAATTGGGACAGACTAGTAAAAAAACCAAAGGGACAATTCAAAGCTCACTTTCTGGTGTTCATAAGCAAGTATGGCAGAGTGGGGAAATGTATACACTTGAACAGTTTGAGTCTAAATCGAAGACTTTTGCTAGAAGTGTACTGGGTATGGTTAAGGAGGTTTCTCCTCTGGTTATTGAGGCTATGTTTTGGAAGGCAACTTCAGAGAAACCTATATATGTGGAGTATGCCAATGATATGCCTGGGTCTGCTTTTGGGGAATCCAAGGGTCAATTTCATTATATTCGTAGAAGGCGAAGGAAAAAGGCGTATTATCAAAGGAGTCTAGATACCACAGATTGCCAAGTACCCAAAATGGATAAAATAAGAGATACCCATACTGGTGAAAGTAAGGATTCTTCTGCTCATAACCATGCTGACGCATGCATACAGGCATCAAATTCGACTTCAAGTCCGTCAACATTTTCATCAAATGATGCCCCACATTCTCTCAGGCCGAAGAGTTCAGATTCCGGCAACGAGATGGAAGGTACTGCTGGTTGGAAGCTTTCGAACAGCCCTTGGAACTTACAAGTTATTGCACGTTCACAGGGCTCGCTAACTCGTTTCATGCCGGATGATATTCCTGGTGTTACTTCCCCCATGGTATACATTGGCATGTTATTCAGTTGGTTTGCTTGGCATGTGGAGGATCATGAACTTCATAGCATGAATTTTCTTCATGTTGGCTCGTCAAAGACGTGGTATTCTGTTCCTGGAGACTATGCTTCGGCTTTTGAGGAACTCATCCGCACTAAGGTTTATGGTGGTAATATTGATCACTTAGCTGCTTTGACTCTGCTGGGGGAGAAGACAACCCTTCTATCACCGGAGGCAGTTGTTGCGTCTGGGATCCCTTGTTGTAGGTTGACGCAGAACCCTGGAGAATTTGTTGTGACCTTTCCAAGGGCTTATCATGTAGGATTCAGCCATGGTTTTAACTGTGGGGAAGCTGCTAACTTTGGAACTCCACAATGGCTCACAATAGCCAAGGAAGCTGCAGTGCGTAGGGCTGCAATGAATTATCTCCCCATGCTTTCTCATCAGCAGCTGCTTTACTTATTGACTATGTCTTTTGTTTCAAGGGTGCCAAGAGCATTATTACCAGGTGTGAGGAGTTCCCGTCTGAGAGACCGTCAAAAAGAAGAAAGAGAATTGTTAGTGAAAAGATCTTTTATAAAAGATATGCTGCAAGAAAACAATCTGCTATCCATTCTTCTTGGAAAGCAATCAACTTATCATGCTGTTTTATGGAATGCTGATTTACTCCCAGATTCGAGCAAGGATACTCCTCGGTTGCCTGACATGACTTCTACTACTAGAACCTCAATGGAAGACATGTCAAATTTGAGTTCTGCTGATAAGAGCAATCACGGTTGTCTGTTTGATGAAATGAGCTTGTATATGGAGAATCTGACTGAATTTTATAATGGTGACGACAGTCTTCCATGTCATTTCCAAACTGACTCTGGAGCATTGGCATGTGTGGGTTGTGGAATACTCGGTTTTCCATTCATGGCTGTGGTGCAACCATCAGAGAGATCAGCAATGGAACTTCTGCCAGTCTCAGGGAATGCTCTTTCTGTTACTGATCTACCTTCAACAAATGCACCAACGAAACTATCATCAATGAACAGTGACAAGGGTTGGAACATCTCTTGTAAACTTTTGAGGCCTCGAATTTTCTGTCTGGAGCATGCTGTCCAGATTTTGGAGATACTGCATGGTAAAGGTGGAGCTAGTGTACTTGTAATTTGCCATTCAGACTACCAGAAAATCAAGGCACATGCCAGTGCAGTAGCAGAGGAGATAGGCTGTGCTTTTGATTATAATGAGGTCCCTTTAGAGACTGCATCCCCTGAAGAATTGACCTTGATAGATCTTGCGATTGATGGTGAAGAACACAATGAATGTGAAGAAGACTGGACATCTAAATTAGGAATTAACCTGCGACATTGCATTAACGCGAGAAAGAAATCTGCAGATAAACAAGCCCCTTTCAAATTGGCACTGGGAATGTCGTTCCCAGAGAAATTTCCTGATTCAGATGTCATGTCTGTGAATTGGCAGTCTAAGAGATTTCGCTCCAGAAGGTTGAAGTATTTAACTCAGGTAAAAGCATGTGATGGGATTCAGAGAAAGAAGGGGGATCAGTTGGAAGGAAAGGCAGATGGCTCCACTGGTAAAAAGATGCTTCAGTATTCAAGGAGAAAGTTCAGGTCAAAACAAGGTTGTTCCTCTGGATCAAACATGGTTCATGTACCCCCTAAGGAGTCCATAAATGTGCCAACTGTCTTGAGTGGAGATTCTGGTAACCAGGCTCCTGAAAATGAGCCTGGCACCGAGAATTGTAGGAGTGATTGTGCACTGTCATGTGCCTCGCAAACTGAAAACCAACTTACCGAAATGACCACTAGTCTGAGTTTGAAAGTTACTTCTTCACAACCTTCAGATTTCACTCGGGAACATATGTCAGAAGAAGAAAATGTTGGACCAGAGGTCCAGAATCAAACTACACAGGAATTAAAGATAGATGGCAAAAATAGTTGCACAACACCTGATCATTCTATGATGCCTTGTAACGTGGGTGCCTTAGAAGTTGGTAATAAGGACCCAGAGATTTTGCATGACAAAATAAATTCTAGCTCACTTACCGTTGCTAAAGACAAAAATATTGACATGCTTACTGAGAACCTTGTCACTGAAGCAATTAACACCAATTGTAGCAACAGCCTGGATTTCAATGAAGCACATCAAGAATTTGAGTGTACCCACCAGGGTAATCAGGTTGAAGCTGCTTCATCTCCTGTTTCATCGGTAACTCAGCAGACACCTGCCTTCATGGGAGAGAATTCTGATTGTGCTAGAAATAGTACTGAAAGCGTGAGCTATGGTGCATCCTTGAAAGAGACAACGGACACTTCTGGTTTGAATGCAAACAACATGGAACCTACTGTGAGTTGTGATAAATCAATAAATGAGCCGATGTCAAATACCGACGCTCATGAAGTTCCAAAAGAGCTTTGTGCCTCTGCAGACTCCAGCCCTCAATTTACTTCAGATGTGAGAAGAGAACTGGAAACCCATCCAAAAAGCATGAATGATGAGGAAATCTGCTCTGGTTCTGGTGCTGAGCCATCATTAAAGGACTCTTCTGTGTCAACCCGGGAATGTTCTGCATCCGAGGGAGAGAAATGTGCTAGCGATAGCTGCAACGGAAGTAAAGTTAATTTTTCACAAGACCATAGGGAGATGGCAAGCTCTGAAAGTTCGCCAGGCCTTAGGTCAAATACACAGAAGAAAAGAAACAGGGAATTGGAACAGATACAAGACATTGATACAAGTTTCCAAGGCTTTGTTAGAAGCCCATGTGAAGGGTTGAGACCGAGGGCTTGTAAAGGAGCTCCTGACAGAAGCATGGCAGAAACCTGCAATTCTGTGGAGGAAAATCGGGAGGTTAAAAGGGCTAGGAGGAAAACATCAGATGTTGTGGTGTCTAGCAAGAATAAGAAGAGGTCTCACAAGTGTGACCTTGATGGTTGCCATATGAGTTTTACAACCAAGGTAGAGTTGATGTTGCACAAGCGCAACCGCTGCCCTTATGATGGGTGTGGAAAGAAGTTCAGATCCCACAAATATGCTGTGCTTCACCTGCGTGTCCATGATGACGACAGGCCCCTTAAGTGCCCATGGGAAGGTTGTTCAATGTCATTCAAGTGGGCATGGGCCCGAACCGAGCATATTCGAGTGCATACTGGGGAAAAGCCATACCACTGCAAGGTTGATGGTTGTGGCCTTTCATTCAGATTCGTATCAGATTATAGTAGGCACAGGCGGAAAACTGGGCACTATGTAAAGTCAGTTGATTGA 4239 0.4348 MGNVEIPNWLKDLPLAPEFRPTDTEFADPIAYISKIEKEAGAFGICKIIPPLPKPSKRYVFSNLNKSLLKSPELGSDSNSVGVSNPLKIVSGDNGGSDGEARAVFTTRHQELGQTSKKTKGTIQSSLSGVHKQVWQSGEMYTLEQFESKSKTFARSVLGMVKEVSPLVIEAMFWKATSEKPIYVEYANDMPGSAFGESKGQFHYIRRRRRKKAYYQRSLDTTDCQVPKMDKIRDTHTGESKDSSAHNHADACIQASNSTSSPSTFSSNDAPHSLRPKSSDSGNEMEGTAGWKLSNSPWNLQVIARSQGSLTRFMPDDIPGVTSPMVYIGMLFSWFAWHVEDHELHSMNFLHVGSSKTWYSVPGDYASAFEELIRTKVYGGNIDHLAALTLLGEKTTLLSPEAVVASGIPCCRLTQNPGEFVVTFPRAYHVGFSHGFNCGEAANFGTPQWLTIAKEAAVRRAAMNYLPMLSHQQLLYLLTMSFVSRVPRALLPGVRSSRLRDRQKEERELLVKRSFIKDMLQENNLLSILLGKQSTYHAVLWNADLLPDSSKDTPRLPDMTSTTRTSMEDMSNLSSADKSNHGCLFDEMSLYMENLTEFYNGDDSLPCHFQTDSGALACVGCGILGFPFMAVVQPSERSAMELLPVSGNALSVTDLPSTNAPTKLSSMNSDKGWNISCKLLRPRIFCLEHAVQILEILHGKGGASVLVICHSDYQKIKAHASAVAEEIGCAFDYNEVPLETASPEELTLIDLAIDGEEHNECEEDWTSKLGINLRHCINARKKSADKQAPFKLALGMSFPEKFPDSDVMSVNWQSKRFRSRRLKYLTQVKACDGIQRKKGDQLEGKADGSTGKKMLQYSRRKFRSKQGCSSGSNMVHVPPKESINVPTVLSGDSGNQAPENEPGTENCRSDCALSCASQTENQLTEMTTSLSLKVTSSQPSDFTREHMSEEENVGPEVQNQTTQELKIDGKNSCTTPDHSMMPCNVGALEVGNKDPEILHDKINSSSLTVAKDKNIDMLTENLVTEAINTNCSNSLDFNEAHQEFECTHQGNQVEAASSPVSSVTQQTPAFMGENSDCARNSTESVSYGASLKETTDTSGLNANNMEPTVSCDKSINEPMSNTDAHEVPKELCASADSSPQFTSDVRRELETHPKSMNDEEICSGSGAEPSLKDSSVSTRECSASEGEKCASDSCNGSKVNFSQDHREMASSESSPGLRSNTQKKRNRELEQIQDIDTSFQGFVRSPCEGLRPRACKGAPDRSMAETCNSVEENREVKRARRKTSDVVVSSKNKKRSHKCDLDGCHMSFTTKVELMLHKRNRCPYDGCGKKFRSHKYAVLHLRVHDDDRPLKCPWEGCSMSFKWAWARTEHIRVHTGEKPYHCKVDGCGLSFRFVSDYSRHRRKTGHYVKSVD 1412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g3225 1412 MobiDBLite consensus disorder prediction 887 907 - -
Mibi02g3225 1412 SMART cupin_9 292 461 IPR003347 -
Mibi02g3225 1412 MobiDBLite consensus disorder prediction 887 903 - -
Mibi02g3225 1412 MobiDBLite consensus disorder prediction 1134 1179 - -
Mibi02g3225 1412 Pfam jmjN domain 17 50 IPR003349 -
Mibi02g3225 1412 Gene3D Classic Zinc Finger 1318 1405 - -
Mibi02g3225 1412 ProSiteProfiles JmjN domain profile. 16 57 IPR003349 -
Mibi02g3225 1412 MobiDBLite consensus disorder prediction 1143 1157 - -
Mibi02g3225 1412 MobiDBLite consensus disorder prediction 1204 1220 - -
Mibi02g3225 1412 ProSitePatterns Zinc finger C2H2 type domain signature. 1382 1406 IPR013087 -
Mibi02g3225 1412 Gene3D Cupin 9 465 - -
Mibi02g3225 1412 PANTHER LYSINE-SPECIFIC DEMETHYLASE 8 1346 - -
Mibi02g3225 1412 SMART c2h2final6 1320 1344 IPR013087 -
Mibi02g3225 1412 SMART c2h2final6 1380 1406 IPR013087 -
Mibi02g3225 1412 SMART c2h2final6 1350 1374 IPR013087 -
Mibi02g3225 1412 SMART c2h2final6 1297 1319 IPR013087 -
Mibi02g3225 1412 MobiDBLite consensus disorder prediction 225 292 - -
Mibi02g3225 1412 FunFam Probable lysine-specific demethylase ELF6 1347 1376 - -
Mibi02g3225 1412 MobiDBLite consensus disorder prediction 551 574 - -
Mibi02g3225 1412 SUPERFAMILY Clavaminate synthase-like 293 459 - -
Mibi02g3225 1412 SUPERFAMILY beta-beta-alpha zinc fingers 1320 1357 IPR036236 -
Mibi02g3225 1412 ProSiteProfiles Zinc finger C2H2 type domain profile. 1320 1349 IPR013087 -
Mibi02g3225 1412 ProSiteProfiles Zinc finger C2H2 type domain profile. 1380 1406 IPR013087 -
Mibi02g3225 1412 MobiDBLite consensus disorder prediction 225 246 - -
Mibi02g3225 1412 ProSitePatterns Zinc finger C2H2 type domain signature. 1322 1344 IPR013087 -
Mibi02g3225 1412 SUPERFAMILY beta-beta-alpha zinc fingers 1360 1403 IPR036236 -
Mibi02g3225 1412 MobiDBLite consensus disorder prediction 247 292 - -
Mibi02g3225 1412 ProSiteProfiles JmjC domain profile. 292 461 IPR003347 -
Mibi02g3225 1412 SMART JmjN_1 15 55 IPR003349 -
Mibi02g3225 1412 ProSitePatterns Zinc finger C2H2 type domain signature. 1352 1374 IPR013087 -
Mibi02g3225 1412 Pfam JmjC domain, hydroxylase 325 444 IPR003347 -
Mibi02g3225 1412 MobiDBLite consensus disorder prediction 1204 1227 - -
Mibi02g3225 1412 MobiDBLite consensus disorder prediction 554 574 - -
Mibi02g3225 1412 ProSiteProfiles Zinc finger C2H2 type domain profile. 1350 1379 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g3225 Mibi-ChrMibi02 57407151 57415685 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g3225 1 861 C2H2 Transcription Factor Family AT5G04240 57.793 0.0 971
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mibi02g3225 JmjC 4.2e-36 CL0029
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g3225 02 57407151 57415685 Mibi02g3225 02 57407151 57415685 ECH