Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g3222 ATGGAGTTTTCGAAGGTTAATGACGTATTTGACCTCTGCAATGGCAGTGATCCTCTGAATTGGGGGGTGGCGGCGGAGGAGATGAGGGGGAGTCATTTGGAGGAGGTGAAGAGGATGGTGGAGGAGTACAGGAGGGAGGTGGTGAGGATCGCCGGGAAGTCTCTGAGGATATCTCAGGTGGCGGCGATTGCCAACCATGACGGCGGCGTGGCGGTGGAGCTGGCGGCGGAGGCTCGTGCCGGAGTTAAGGCTAGTAGTGATTGGGTGATGGAGAGCATGAATAAAGGTACTGATAGTTATGGCGTCACCACTGGATTCGGTGCTACCTCCCACAGGAGAACAAAACAAGGTGGGGCCCTCCAGAATGAGCTCATCAGATTCTTGAATGCTGGAATCTTTGGCAATGGAACAGAATCATCTCACATGTTACCTCATACAGCCACAAGAGCTGCCATGTTGGTCAGAATCAACACACTTCTTCAAGGATACTCAGGAATCAGATTCGAGATATTGGAAGCCATGACCAAGTTCCTTAACCACAACATCACCCCATGTCTCCCTCTCCGGGGCACCATCACCGCCTCCGGCGACCTCGTCCCTCTCTCCTACGTGGCCGGCCTCTTGATCGGCCGTCCCAACTCCAAATCCATTGGCCCTGATGGCAGAGTCATCTCTCCCAAAGAAGCATTCCAAATTGCAGGAATTGATGGAGGTTTCTTTGAACTACAGCCTAAAGAAGGATTGGCTCTTGTTAATGGTACTGCTGTTGGTTCTGCTTTGGCTTCCATGGTTCTATTTGAGGCCAACATCCTTTGTGTACTGTCCGAAGTCTTGTCCGCGATTTTCGCCGAGGTTATGCAGGGGAAACCCGAGTTTACTGACCACTTGACACATAAATTGAAACACCATCCTGGCCAAATTGAGGCTGCAGCTATCATGGAACACATTTTGGATGGAAGCTCTTATGTTAAAGCAGCTCAGAAGCTTCATGAGCTTGATCCTCTTCAGAAGCCTAAACAAGACAGGTATGCTCTGAGAACTTCTCCTCAATGGCTTGGGCCGCAGATTGAAGTGATCAGACATGCGACGAAGATGATTGAGAGAGAGATCAATTCTGTGAATGACAATCCATTGATTGATGTTTCAAGGGGGAAGGCACTTCATGGAGGAAACTTCCAAGGTACTCCCATTGGTGTTTCCATGGACAACACTCGTTTGGCACTTGCTTCCATTGGAAAACTCATGTTTGCTCAGTTCTCTGAGCTTGTCAATGACTTTTACAACAATGGCTTGCCTTCAAACCTATCTGCTAGCCGAAGCCCAAGCTTGGATTACGGATTCAAAGGAGCTGAAATCGCCATGGCTTCCTACTGTTCTGAGCTTCAATTCCTTGCAAATCCTGTGACAAACCATGTACAAAGTGCAGAGCAACACAACCAAGATGTAAACTCTTTAGGACTGATTTCCTCAAGAAAAACAGCTGAAGCCGTGGAGATTTTGAAGCTCATGTCCTCCACTTTCTTAATTGCATTATGCCAAGCCATTGACTTAAGGCATTTGGAAGAGAACTTGAAGAACACTGTGAAGAACACCGTGACACAAGTGGCCAAGAAGGTCCTAACAATGGGTGTCAATGGAGAATTACTCCCTTCAAGATTTTGCGAAAAGGACTTGATCACCGTCGTGGATCGCGAACACTTGTTCGCCTACATCGACGATCCTTGCAGCGCCACATACCCATTGATGCAGAAGTTGAGACAAGTTCTGGTTGATCATGCCCTGCAAAATGGTGACAGAGAGAGTGACTCAAACACCTCAATTTTCTTAAAGATTGCAACTTTTGAGGAAGAACTCAAGACCCATTTGCCAAAAGATGTAGAGAATGCAAGGATTGAGGTTGAGAATGGGAAATCAGCAATCCCTAATAGGATCAGAGAATGCAGGTCTTATCCATTGTACAGATTTGTGAGAGAAGGACTTGGGACTGGTTTGTTAACAGGTGAGAAAGTTAAGTCACCTGGAGAAGAATGTGACAAAGTCTTCGCTGCAATGTGTGAAGGAAAGTTGGTTGATCCTTTATTGGAGTGCCTTAAGGAGTGGAATGGGGCTCCTCTGCCAATATGTTAG 2127 0.4725 MEFSKVNDVFDLCNGSDPLNWGVAAEEMRGSHLEEVKRMVEEYRREVVRIAGKSLRISQVAAIANHDGGVAVELAAEARAGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKQGGALQNELIRFLNAGIFGNGTESSHMLPHTATRAAMLVRINTLLQGYSGIRFEILEAMTKFLNHNITPCLPLRGTITASGDLVPLSYVAGLLIGRPNSKSIGPDGRVISPKEAFQIAGIDGGFFELQPKEGLALVNGTAVGSALASMVLFEANILCVLSEVLSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVKAAQKLHELDPLQKPKQDRYALRTSPQWLGPQIEVIRHATKMIEREINSVNDNPLIDVSRGKALHGGNFQGTPIGVSMDNTRLALASIGKLMFAQFSELVNDFYNNGLPSNLSASRSPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVEILKLMSSTFLIALCQAIDLRHLEENLKNTVKNTVTQVAKKVLTMGVNGELLPSRFCEKDLITVVDREHLFAYIDDPCSATYPLMQKLRQVLVDHALQNGDRESDSNTSIFLKIATFEEELKTHLPKDVENARIEVENGKSAIPNRIRECRSYPLYRFVREGLGTGLLTGEKVKSPGEECDKVFAAMCEGKLVDPLLECLKEWNGAPLPIC 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g3222 708 Pfam Aromatic amino acid lyase 55 530 IPR001106 -
Mibi02g3222 708 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 190 206 IPR022313 GO:0016841
Mibi02g3222 708 Gene3D - 10 254 IPR024083 -
Mibi02g3222 708 CDD PAL-HAL 53 518 IPR001106 -
Mibi02g3222 708 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 17 698 IPR005922 GO:0005737|GO:0006559|GO:0016841
Mibi02g3222 708 FunFam Phenylalanine ammonia-lyase 10 254 - -
Mibi02g3222 708 FunFam Phenylalanine ammonia-lyase 255 556 - -
Mibi02g3222 708 Gene3D - 521 642 IPR023144 -
Mibi02g3222 708 Gene3D Fumarase/aspartase (Central domain) 255 703 - -
Mibi02g3222 708 SUPERFAMILY L-aspartase-like 17 708 IPR008948 GO:0003824
Mibi02g3222 708 FunFam Phenylalanine ammonia-lyase 521 642 - -
Mibi02g3222 708 PANTHER HISTIDINE AMMONIA-LYASE 11 708 IPR001106 -
Mibi02g3222 708 Coils Coil 33 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g3222 Mibi-ChrMibi02 57338869 57343498 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g3222 16 708 Monolignol Biosynthesis Gene Families AT3G53260 81.385 0.0 1200