Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g3217 ATGGATGAGAGGGTTTCATCAGAAAAGTGCTTAGATTCTCAATTATGGCACGCCTGTGCTGGTGCGATGGTTCAAATGCCACCTATGAATTCCAAAGTCTTCTACTTCCCTCAGGGCCACGCGGAGCACGCCCAGGGGAAGGTGGATTTCGGGTCGACCCGAATTCCCCCTTTCATTCCTTGCAGGGTTTCTGGTATGAAATACATGGCAGACCCTGACACCGATGAGGTGTTTGTGAAAATGAGACTAACCCCTCTCAGAGATAATGAGATGGGTTTTGAAGATGATAGCTTTTTGGGGAATCATGGAGCTGAAGGTCAAGAAAAGCCTGCTTCTTTTGCTAAGACATTGACTCAATCTGATGCCAATAATGGCGGAGGTTTCTCTGTCCCTCGTTATTGTGCAGAGACCATCTTTCCTAGATTGGATTATTCTGCAGAACCTCCAGTTCAGACAATTATTGCCAAGGATGTTCATGGACAGAACTGGAAGTTTAGGCACATCTATAGAGGGACCCCTCGCAGGCACCTTCTGACAACTGGATGGAGCAATTTTGTGAACCAGAAGAGGCTTGTTGCTGGGGATTCTATTGTGTTCTTGAGGGCTGAAAATGGAGATCTTTGTGTTGGAATAAGGAGGGCTAAGAAGGAGATTGGTGGTGGAATTGAGTACCCAACTGGATGGAATCATCAGGCAGTCCCATTGTTTGGTGGGAATTCAGGTTTCATGCGTGAAGATGAGAGTTCGTTGATGATGAGGAGGAAATCTCATGATGATGTTAAGGGAAGAGTGGCAGCTGAATCTGTTGTTGAAGCTGTGACTTGTGCTGTTAATGGCAGGCCTTTTGAGGTTGTGTACTATCCTCGAGCTAGCACGCCGGAGTTCTGCGTTAAGGCCTCCTCTGTGAGGGCTGCAATGCAAATTCAGTGGTGTTCTGGGATGAGATTCAAGATGCCTTTTGAAACTGAGGATTCCTCCAGGATCAGCTGGTTCATGGGCACAATATCTTCTGTTCAGGTCGCCGATCCTGTTCGCTGGCCTGATTCTCCATGGCGTCTCCTACAGGTAGCATGGGATGAACCAGATTTGCTTCAGAATGTTAAGAGTGTAAACCCTTGGTTGGTTGAACTAGTCTCGAATATGCCAACCTTCCATCTCTCTCCATTCTCACCGCCAAGGAAGAAATCGCGGTTTCTGCAGCACCCGGAATTTCCTCTCCTCAATCAGCTTCCTATGCCTCCGTTCTCTGGAAACCTCCTCAATCAAACTAACTCCCCTTGTCACGTTCATGACAGTTATAGTCCTGCAGGCATACAGGGAGCCAGGCATGCTCAATATGGTCTCTCTCCATGTGATTTCCCTTTCAACAAGCTGCAATCAGATATGCTTCTCGGCAAACTTCCGAGGCTCGACCATAGTCCTGTCCAGCCTCCTAGACCTCCTCCTCGGACTGCCTACAATAGCAGCCTGAAGAACAATGCTGAAATATCATGCTTGTTATCCATGGGAAATCCCAGCCCGAGCTTGAAGGAATCAGTTGATGCCAAAACACCTCATATCTTGTTGTTTGGTCAGCGCATTCACACTGAACAGCAGAGTTCAATCAGTAGCTCTGCTAGCACAACTGGGAATAGTTCATCCGAAGGGACTTCCCAGAAGGCGTCCAATGTTGTTTCTGATGGCTCGGGTTCTTCTGCTTTGCACCGAAACAGTCCGACAGAGAATTCTTCTGAAGGAGGGTCTCCCTGGTACAAAGATCAGCACAATTCTGATATCGGAACCGAAAACGTTAACCTGTTGTGTTTGGCCTTATAA 1815 0.4755 MDERVSSEKCLDSQLWHACAGAMVQMPPMNSKVFYFPQGHAEHAQGKVDFGSTRIPPFIPCRVSGMKYMADPDTDEVFVKMRLTPLRDNEMGFEDDSFLGNHGAEGQEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTIIAKDVHGQNWKFRHIYRGTPRRHLLTTGWSNFVNQKRLVAGDSIVFLRAENGDLCVGIRRAKKEIGGGIEYPTGWNHQAVPLFGGNSGFMREDESSLMMRRKSHDDVKGRVAAESVVEAVTCAVNGRPFEVVYYPRASTPEFCVKASSVRAAMQIQWCSGMRFKMPFETEDSSRISWFMGTISSVQVADPVRWPDSPWRLLQVAWDEPDLLQNVKSVNPWLVELVSNMPTFHLSPFSPPRKKSRFLQHPEFPLLNQLPMPPFSGNLLNQTNSPCHVHDSYSPAGIQGARHAQYGLSPCDFPFNKLQSDMLLGKLPRLDHSPVQPPRPPPRTAYNSSLKNNAEISCLLSMGNPSPSLKESVDAKTPHILLFGQRIHTEQQSSISSSASTTGNSSSEGTSQKASNVVSDGSGSSALHRNSPTENSSEGGSPWYKDQHNSDIGTENVNLLCLAL 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g3217 604 FunFam Auxin response factor 310 383 - -
Mibi02g3217 604 MobiDBLite consensus disorder prediction 531 589 - -
Mibi02g3217 604 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 8 557 IPR044835 GO:0003677|GO:0006355|GO:0009725
Mibi02g3217 604 SMART B3_2 113 215 IPR003340 GO:0003677
Mibi02g3217 604 Pfam B3 DNA binding domain 113 214 IPR003340 GO:0003677
Mibi02g3217 604 CDD B3_DNA 112 213 IPR003340 GO:0003677
Mibi02g3217 604 ProSiteProfiles B3 DNA-binding domain profile. 113 215 IPR003340 GO:0003677
Mibi02g3217 604 Pfam Auxin response factor 272 355 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Mibi02g3217 604 Gene3D - 309 383 - -
Mibi02g3217 604 FunFam Auxin response factor 111 215 - -
Mibi02g3217 604 SUPERFAMILY DNA-binding pseudobarrel domain 105 215 IPR015300 -
Mibi02g3217 604 Gene3D - 111 215 IPR015300 -
Mibi02g3217 604 MobiDBLite consensus disorder prediction 468 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g3217 Mibi-ChrMibi02 57184950 57187170 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g3217 7 590 B3 DNA Binding Superfamily AT4G30080 58.221 0.0 628
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Mibi02g3217 B3 4.4e-22 CL0405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g3217 02 57184950 57187170 Mibi02g3217 02 57184950 57187170 ECH