Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g3172 ATGTTTGCTTGTGGAATACGTATTGTGACGAAACCCACACATCCCTTGCTTTTTCATGCTCTTCCCAGCAGACAGACACATCTAACACTAATCATCACCTTCTTCTTCTTCTTCTTCAACCTTTCTTTTCTCTCATATCTCTCTGTATCAATCTCAATATATCTTGTTAATCCTTCTGCTTATATGAGAATGGAAATGGAGTACAAAATCAAGGCCACCACCTCACCATCTCCCTCTCCCTCTCCTCCTCCTCCTCCGCCGCCTTCACAGCCACAATCGCCGCCGTGTCCGGTGGTGGTTTCCCCGTGCGCCGCCTGCAAGATCCTCCGGCGGCGGTGTGTGGAGAAGTGTGTTCTTGCTCCCTATTTCCCTCCCACCGATCCCCTCAAGTTCACCATTGCTCACAGGGTCTTTGGAGCCAGCAACATCATCAAGTTCTTGCAGGAACTGCCAGAGTCACAAAGATCAGATGCAGTGAGCAGCATGGTGTATGAAGCAAATGCAAGAATAAGGGACCCAGTGTACGGATGTGCTGGAGCCATATGTCAGCTACAGAAGCAAGTGAGCGAGCTGCAAGGTCAGCTAGCCAAGGCTCAAGCCGAGCTGGTCAACATGCATTGCCAGCAAGCCAACTTGGTGGCTCTCATTTGCATGGAAATGACTCAATCTCACCCTTCTTCTTCATCTGACCCACCACACTCCATGAATATGATGATGGCGGCTTCGGCTCAGTCCTCGGCTCAGCCGCCGCCTCACGATGATATAAGCTGCTTTTTAGATGACAACAACAACACCATGAATAGCTTCGGCTCGGCTTGGGCTTGGGAGCAGCTTTGGACATGA 843 0.503 MFACGIRIVTKPTHPLLFHALPSRQTHLTLIITFFFFFFNLSFLSYLSVSISIYLVNPSAYMRMEMEYKIKATTSPSPSPSPPPPPPPSQPQSPPCPVVVSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPESQRSDAVSSMVYEANARIRDPVYGCAGAICQLQKQVSELQGQLAKAQAELVNMHCQQANLVALICMEMTQSHPSSSSDPPHSMNMMMAASAQSSAQPPPHDDISCFLDDNNNTMNSFGSAWAWEQLWT 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g3172 280 MobiDBLite consensus disorder prediction 72 93 - -
Mibi02g3172 280 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 101 240 - -
Mibi02g3172 280 Pfam Lateral organ boundaries (LOB) domain 102 199 IPR004883 -
Mibi02g3172 280 Coils Coil 181 208 - -
Mibi02g3172 280 MobiDBLite consensus disorder prediction 76 93 - -
Mibi02g3172 280 ProSiteProfiles LOB domain profile. 101 202 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g3172 Mibi-ChrMibi02 56589337 56591679 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g3172 98 280 AS2 family AT1G07900 62.295 5.00e-72 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mibi02g3172 LOB 8.1e-41 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g3172 02 56589337 56591679 Mibi02g3172 02 56589337 56591679 ECH