Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g3165 ATGGCCAATGCTCTATTCCCCATTCCCCAATACAACAAGCAGCTTCAACAAAATACTGATGCAGAACCAATAGAAACCACTGGCATTTTAGAGGCTAGTCTCTTCTCCCCACACAAAGATCCAGATACAGCCATGTCTGGAAACACAAGTTGCACTGTTTACATAGGCAATCTGGATGAGAAAGTCACGGAGAGGATCTTATATGATATATTAATCCAAGCAGGACGAGTGGTGGACCTGTATATTCCTAGAGATAAGGAATCTGAAAAACCTAAAGGATTTGCCTTTGCAGAATATGAAAGTGAGGAGATAGCAGATTATGCTGTCAGGCTTTTCTCAGGCCTTGTGACACTCTACAACAGAACGCTGAAGTTTGCGAAATCTGGCCAAGACAAATCTACTCCGAATGCTTCTGCAGTGGCTACACCCTCATCAAATTCTTCTAAAAGATCAAGGCCCCACCCTGTGCCAATAAATAATACAGAAATTTCTCAGTACTCTGCTAGGTTACCAACACCTAGCCGAGTTTCAGATTACCCTGGAAATTACTCCCGAGTTACCCACCGGGTAGTTGACCAATCTAGTGAGTATGGATCTCTCTACAATGGCAATGATTATGAATACAGCCGAAGAGTCTTTGGGCCGACATTGGATAGCATTAACCAGTATAGGTCAGGCCGCTATGATACAAGTAACCCAATCCATTACCCATCCTACTAA 720 0.4319 MANALFPIPQYNKQLQQNTDAEPIETTGILEASLFSPHKDPDTAMSGNTSCTVYIGNLDEKVTERILYDILIQAGRVVDLYIPRDKESEKPKGFAFAEYESEEIADYAVRLFSGLVTLYNRTLKFAKSGQDKSTPNASAVATPSSNSSKRSRPHPVPINNTEISQYSARLPTPSRVSDYPGNYSRVTHRVVDQSSEYGSLYNGNDYEYSRRVFGPTLDSINQYRSGRYDTSNPIHYPSY 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g3165 239 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 51 130 IPR000504 GO:0003723
Mibi02g3165 239 SMART rrm1_1 52 126 IPR000504 GO:0003723
Mibi02g3165 239 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 53 124 IPR000504 GO:0003723
Mibi02g3165 239 SUPERFAMILY RNA-binding domain, RBD 34 125 IPR035979 GO:0003676
Mibi02g3165 239 PANTHER RNA BINDING MOTIF RBM PROTEIN -RELATED 45 236 - -
Mibi02g3165 239 MobiDBLite consensus disorder prediction 128 180 - -
Mibi02g3165 239 Gene3D - 43 140 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g3165 Mibi-ChrMibi02 56422512 56424383 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g3165 38 116 Eukaryotic Initiation Factors Gene Family AT4G34110 31.646 2.52e-07 49.3