Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g3136 ATGCAGGAGAGATCTTCAATGGCAGACATGGAATCATGTGTGCCACCGGGCTTTAGATTTCATCCGACAGAGGAAGAACTAGTTGGATATTACCTCAAGAGGAAGATCAACTCACTCAAAATCAACTTAGATGTCATTGTTGAACTAGATCTCTACAAAATTGAACCGTGGGACATACAAGATAGATGCAAGCTAGGATATGAGGAGCAGAACGAGTGGTATTTTTTCAGCCACAAGGACAAGAAGTATCCGACGGGGACAAGGACGAATAGGGCAACAACAGCAGGATTCTGGAAAGCAACGGGGAGAGACAAGGCTGTGATGTCAAAGAACAAGATCATAGGTATGAGGAAGACTCTTGTGTTCTACCAGGGGCGTGCTCCTAATGGCAGGAAATCTGATTGGATCATGCATGAATATCGCCTCCAATCTTCTGAACATGCCCCTCCTCAGGAAGAAGGATGGGTAGTGTGCAGAGCATTCAAAAAGCCCAGTCCTAGTCATATGAGGCCAGGTTATGAAGCAGCACAGTGCTATTTCAGAGATCATGAGATCAGCCATGGAAGGCCTTCGATCTCTTCATTTTCTGAGATTCTGAATCAAACCCATCATTATCTGAATAACAATAACTCTCATCATCATCATCATCATCATCATCATAACCAACCCTTAATCAGCTTGGATCTTCAGCAGCATCAACAACTTGTTGATCTTCCTCAACTAGATAGCCCTAGTTTGGGAATAAGATCATCATCAGATAATAATTATGGCCAAACCAATAATATTAATAATATTGGGGAAGAATATTACAGTGATGACGTGGAAAGCTTGGATCAATTGTTTGCTTCAAATCTGACAGATACTTCAACTTCTGTTTCAGATGCTGCTTTCTTTGCTCACTCCAATAACTTCCCCATGAATATGATCATACCTCATCACAATCAAGCAAGCCATGCCCTAGGATTGTGCTTTCCTGATTCTTCATAG 987 0.4195 MQERSSMADMESCVPPGFRFHPTEEELVGYYLKRKINSLKINLDVIVELDLYKIEPWDIQDRCKLGYEEQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAVMSKNKIIGMRKTLVFYQGRAPNGRKSDWIMHEYRLQSSEHAPPQEEGWVVCRAFKKPSPSHMRPGYEAAQCYFRDHEISHGRPSISSFSEILNQTHHYLNNNNSHHHHHHHHHNQPLISLDLQQHQQLVDLPQLDSPSLGIRSSSDNNYGQTNNINNIGEEYYSDDVESLDQLFASNLTDTSTSVSDAAFFAHSNNFPMNMIIPHHNQASHALGLCFPDSS 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g3136 328 FunFam NAC domain-containing protein 23 167 - -
Mibi02g3136 328 Gene3D NAC domain 23 166 IPR036093 GO:0003677|GO:0006355
Mibi02g3136 328 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 11 249 - -
Mibi02g3136 328 SUPERFAMILY NAC domain 5 163 IPR036093 GO:0003677|GO:0006355
Mibi02g3136 328 Pfam No apical meristem (NAM) protein 15 142 IPR003441 GO:0003677|GO:0006355
Mibi02g3136 328 ProSiteProfiles NAC domain profile. 14 163 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g3136 Mibi-ChrMibi02 55988959 55992281 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g3136 10 327 NAC Transcription Factor Family AT1G71930 54.878 1.55e-111 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mibi02g3136 NAM 6.4e-37 No_clan