Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g3122 ATGGAAGATCCAGAAGAAGAAGAGCTCCTAAATCTCAGCCTCTCAGTCTCAACAGTTAGATCCACAGAAAGAAAAAAGAAAGGCAAGATGATGATGTTCAATAGTACTACCACTAGAGATTATCATCATCAGCAACACTTTCATCACCATCATCATCATCAGTACGAACAACCAGGCTTGTTTGAAGGCAAGATCTTCATCCTCCTCCAAACCAGAGAACAAATGCTCCGCCAAGATTATCATCATCACAACAACAATCTCATCACAATGAGAAACTACAACAACAACTACTACAATGTTCTAGAAGATTCCAACAACAATAATAACAATGGTCTCCCTCTTATTCATCTCCTTCTCTCCACAGCCACTTATATTGATGACACAAACATAAACTCGGCCCTAGACAACCTCACTCACCTCTACTCCACCGTCTCCCTCACCGGGGACTCGGTCCAACGTGTTGTTGCCTACTTCGCCGATGGCCTCGCCGCCAGGCTCATCACCAGGAAGTCACCTTTCTATGACATGTTAATGGAAGAACCAACAAGTGAAGAAGAGTTCTTAGCCTTCACTGATCTCTATAGAGTCTCACCTTACTACCAATTCGCTCATTTCACAGCCAACCAAGCCATCCTTGAAGCTTTTGAGAATGAAGAACACAAGAACAATCGCTCCTTACATGTTATTGACTTTGATGTCTCCTATGGTTTCCAATGGCCTTCCTTGATCCAATCACTATCTGAGAAGGCCACCACTGGGAACAGAATCTCACTAAGGATCACTGCCTTTGGGAAGAATCTGAAGAATCTTCAGGAAACAGAATCAAGGTTGACAAGCTTCTCAAAGGGTTTCACCAACCTTGTGTTTGAATTCCAAGGGTTGCTTCGTGGGTCCCGTGTGGTTAACCTAAGGAAGAAGAAGAATGAAACAGTTTGTGTGAATTTGGTGTGCTATCTTAATAGTTTGAGTAGCTTCATGAAGATTTCTGACACGTTGGGATTTGTTCATTCTCTTAATCCATCCATTGTGGTTCTTGTGGAGCAAGAAGGGAGCAGGAATAATCATAATAATAACAATCCAAGGATGTTTTTGTCTAGGTTTACTGATTCGTTGCATTATTTTGCAGCCATGTTTGATTCACTTGATGATTGTTTGCCTATGGAGAGTAATGAGAGGTTGAGGATAGAGAAGAAGCTTTTGGGGAAGGAGATTAAGGCTATGTTGAATTATTATGACCTGGACGGTGTGGATTGTCCCAAGTATGAGAGGATGGAGACTTGGAAGGCTAGGATGGAAAGTCATGGTTTTATTGGGACTAAGGTTAGTTCTAAGGCTTTGATTCAGGCTAAGTTGCTTTTGAAGATGAGGACTCATTATTCTTCGCCGCTTCAATGTGAAGACGACGGAGATGGCGGTGGCGGTGGCGGTGGTGGTTTCCGGGTTTCGGAGAGAGATGAAGGAAGAGCCATTTCTTTGGGATGGCAAAATAGGTTTCTTCTTACAGTCTCAGCATGGCAAACAGTGTAG 1527 0.4289 MEDPEEEELLNLSLSVSTVRSTERKKKGKMMMFNSTTTRDYHHQQHFHHHHHHQYEQPGLFEGKIFILLQTREQMLRQDYHHHNNNLITMRNYNNNYYNVLEDSNNNNNNGLPLIHLLLSTATYIDDTNINSALDNLTHLYSTVSLTGDSVQRVVAYFADGLAARLITRKSPFYDMLMEEPTSEEEFLAFTDLYRVSPYYQFAHFTANQAILEAFENEEHKNNRSLHVIDFDVSYGFQWPSLIQSLSEKATTGNRISLRITAFGKNLKNLQETESRLTSFSKGFTNLVFEFQGLLRGSRVVNLRKKKNETVCVNLVCYLNSLSSFMKISDTLGFVHSLNPSIVVLVEQEGSRNNHNNNNPRMFLSRFTDSLHYFAAMFDSLDDCLPMESNERLRIEKKLLGKEIKAMLNYYDLDGVDCPKYERMETWKARMESHGFIGTKVSSKALIQAKLLLKMRTHYSSPLQCEDDGDGGGGGGGGFRVSERDEGRAISLGWQNRFLLTVSAWQTV 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g3122 508 Pfam GRAS domain family 114 506 IPR005202 -
Mibi02g3122 508 ProSiteProfiles GRAS family profile. 105 506 IPR005202 -
Mibi02g3122 508 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 99 501 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g3122 Mibi-ChrMibi02 55778651 55780177 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g3122 106 506 GRAS Transcription Factor Family AT3G03450 34.135 3.20e-52 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mibi02g3122 GRAS 1.3e-86 CL0063