Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g3110 ATGACCGGCCCAAGGCGAGGTTGCACGTGGCGAGTAGTGATTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATCCGCCATGGCTGCTTCTGCTTCTTCCTCTCCGTCAATTTCTCTCACCTCCGATCAGCTCAAGCACTGTACTGAAGCGCTCGCCAGCTTCAAGCAGAGAACGCCGGAGATGATCCATCAAGAGTTCTTCCACTTGGAGGCCAATGTGATATCGCTAAGTGAGCTGAGGAGGAAATGCACAGTAGCTTTAAATGACGTAAACCTGTTCAAAAATCGGTATCCGGAATTTGTCCTGCCATTTGACGATAACAGGGTTGTTCTGGAACCAAGTTCAGATGATAGACCTACGGCCATGGGATATATCAATGCAAGCTTTCTATCGATCTCTTCCTCAGAGAATGTTTCTCAGTTTATAGCTACACAAGGTCCACTTCCACACACTTGTGAGGATTTCTGGGAAATGATAATCCAATACCGTTGCCCTGTCATTGTGAATCTTACTGCGCTCGTTGAACATAACAAGATTGTAAAATGTGACGATTATTTTCAAGCTGAGGGTGGACCTATGAAGTTTGGTAATATCTCTGTTGTTTGTGAATGGGTTAAAACTATTGAGTACTCATTGGTTCTGCGCCACTTGAAGGTGCATAAAAAGGAAGATCCTCCCTTCTCTGTTTTGCACATTCATTATCCTGAGTGGCCTGACTATGGAGTTCCCGACAATACACATGCCGTGCGCGCAATTTTTAAGAGATTGTACCATGTACCACCAAAACTTGGCCCAATAGTGGTGCACTGCAGTGCAGGTATTGGCAGAACTGGAGCATACTGTGCTGTTCACAATACAATTCAGAGAATCCTTGTTGGGGATAAGTCTGCCTTGGATCTTTGTAATACCATATTTGCCTTCAGGTCACAGCGGTTTGGAATGGCTCAGAAACAGAGCCAGTACAAGTTTTGCTATGAAGCTATTGTAGAGTTACTGGATGAACTTGTTTCTAATCATCATCATCAGCAATGA 1032 0.4467 MTGPRRGCTWRVVIERERERERERSAMAASASSSPSISLTSDQLKHCTEALASFKQRTPEMIHQEFFHLEANVISLSELRRKCTVALNDVNLFKNRYPEFVLPFDDNRVVLEPSSDDRPTAMGYINASFLSISSSENVSQFIATQGPLPHTCEDFWEMIIQYRCPVIVNLTALVEHNKIVKCDDYFQAEGGPMKFGNISVVCEWVKTIEYSLVLRHLKVHKKEDPPFSVLHIHYPEWPDYGVPDNTHAVRAIFKRLYHVPPKLGPIVVHCSAGIGRTGAYCAVHNTIQRILVGDKSALDLCNTIFAFRSQRFGMAQKQSQYKFCYEAIVELLDELVSNHHHQQ 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g3110 343 ProSiteProfiles PTP type protein phosphatase domain profile. 62 331 IPR000242 GO:0004725|GO:0006470
Mibi02g3110 343 SMART PTPc_3 61 333 IPR000242 GO:0004725|GO:0006470
Mibi02g3110 343 FunFam Tyrosine-protein phosphatase non-receptor type 12 41 339 - -
Mibi02g3110 343 ProSitePatterns Tyrosine specific protein phosphatases active site. 268 278 IPR016130 GO:0016311|GO:0016791
Mibi02g3110 343 PRINTS Protein tyrosine phosphatase signature 314 324 IPR000242 GO:0004725|GO:0006470
Mibi02g3110 343 PRINTS Protein tyrosine phosphatase signature 265 283 IPR000242 GO:0004725|GO:0006470
Mibi02g3110 343 PRINTS Protein tyrosine phosphatase signature 123 130 IPR000242 GO:0004725|GO:0006470
Mibi02g3110 343 PRINTS Protein tyrosine phosphatase signature 227 244 IPR000242 GO:0004725|GO:0006470
Mibi02g3110 343 PRINTS Protein tyrosine phosphatase signature 298 313 IPR000242 GO:0004725|GO:0006470
Mibi02g3110 343 PRINTS Protein tyrosine phosphatase signature 141 161 IPR000242 GO:0004725|GO:0006470
Mibi02g3110 343 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 243 322 IPR000387 GO:0016311|GO:0016791
Mibi02g3110 343 MobiDBLite consensus disorder prediction 27 41 - -
Mibi02g3110 343 Pfam Protein-tyrosine phosphatase 91 330 IPR000242 GO:0004725|GO:0006470
Mibi02g3110 343 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 49 333 IPR029021 -
Mibi02g3110 343 Gene3D Protein tyrosine phosphatase superfamily 19 340 IPR029021 -
Mibi02g3110 343 SMART ptp_7 228 330 IPR003595 -
Mibi02g3110 343 MobiDBLite consensus disorder prediction 19 41 - -
Mibi02g3110 343 PANTHER RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE 44 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g3110 Mibi-ChrMibi02 55570314 55577433 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g3110 42 337 Protein tyrosine phosphatase (PTP) family AT1G71860 60.667 6.72e-132 378
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g3110 02 55570314 55577433 Mibi02g3110 02 55570314 55577433 ECH