Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g3108 ATGGCTGCTTCTTCATCTGGAAATTCCATTTCTACTTCTTCCTCATCCTCCTCTCACAAACCGTTCGAATTCTCCCCCGATTCCCCCAATAGAATCTCTCTCACTCCCGATCAGCTCAAGCACTGCTCCCAAGCGCTCTCTATCTTCAGGGACAAGCTTCACGCGCCGAACATCATCGTTCAAGAGTTTGATCAATTGCAGGCCAATAGGATGACACCGAGTGAGATGAGGAGAAGATGCACTGTAGCTATAAATGAAGTAAATGCGAGCAAAAATCGGTATACAGATGTCCTACCATATGACAAGAACAGAATAGTTCTTGAATCAAGTCCAGATTATAGACCCGCGGCCAAGGGATACATCAATGCAAGCTTCATCTCTACCTCTTCCTCTGGAAGTGTTTCTCAGTTTATAGCTACACAAGGCCCACTACCACATACTTATGAGGATTTCTGGGAAATGGTGATCCAATACCACTGCCCTGCTATTGTGATGCTCACTAGGCTTACCGACCAATATAGGGACAAGCATATGGTAAAATGTGGAGAATATTTTCAAGCTGAAAATGGACCCAGAGAGTTAGGCAATGTCTCCATTATCGGCAAATGGATGAAAACTACTGAAACATCACTGGTACTGCGCCATTTGGAGGTGAAGCATAGAGAGGAAGAAGAGCCGCCCTTGTCTGTCTTGCACATTCAATATCCTGAATGGCCTGATCATGGAGTTCCCAAAGACACCTATGTTGTGCGTGAAATTTTGAAAAGGTTGTATCATGTACCTCCAAAACTTGGCCCAATAGTGGTGCACTGCAGTGCAGGTATTGGCAGGACTGGAACATACTGTGCAATCCACAACACAATTCAGAGAATCCTTGCTGGTGATATGTCTGCCTTGGATCTTGGTAATACCATAGCTGTCTTCAGGTCACAGCGTATTGGAATGGTTCAGACACAGGATCAGTACTTTTTCTGCTATAAAGCTATCGTTGAGGAATTGGAAGACCTTGTTTCTCATCAACAATGA 1026 0.4444 MAASSSGNSISTSSSSSSHKPFEFSPDSPNRISLTPDQLKHCSQALSIFRDKLHAPNIIVQEFDQLQANRMTPSEMRRRCTVAINEVNASKNRYTDVLPYDKNRIVLESSPDYRPAAKGYINASFISTSSSGSVSQFIATQGPLPHTYEDFWEMVIQYHCPAIVMLTRLTDQYRDKHMVKCGEYFQAENGPRELGNVSIIGKWMKTTETSLVLRHLEVKHREEEEPPLSVLHIQYPEWPDHGVPKDTYVVREILKRLYHVPPKLGPIVVHCSAGIGRTGTYCAIHNTIQRILAGDMSALDLGNTIAVFRSQRIGMVQTQDQYFFCYKAIVEELEDLVSHQQ 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g3108 341 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 251 323 IPR000387 GO:0016311|GO:0016791
Mibi02g3108 341 MobiDBLite consensus disorder prediction 1 30 - -
Mibi02g3108 341 SMART PTPc_3 58 334 IPR000242 GO:0004725|GO:0006470
Mibi02g3108 341 CDD PTPc_plant_PTP1 120 326 - -
Mibi02g3108 341 ProSitePatterns Tyrosine specific protein phosphatases active site. 269 279 IPR016130 GO:0016311|GO:0016791
Mibi02g3108 341 PANTHER RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE 50 335 - -
Mibi02g3108 341 PRINTS Protein tyrosine phosphatase signature 315 325 IPR000242 GO:0004725|GO:0006470
Mibi02g3108 341 PRINTS Protein tyrosine phosphatase signature 299 314 IPR000242 GO:0004725|GO:0006470
Mibi02g3108 341 PRINTS Protein tyrosine phosphatase signature 266 284 IPR000242 GO:0004725|GO:0006470
Mibi02g3108 341 PRINTS Protein tyrosine phosphatase signature 119 126 IPR000242 GO:0004725|GO:0006470
Mibi02g3108 341 PRINTS Protein tyrosine phosphatase signature 228 245 IPR000242 GO:0004725|GO:0006470
Mibi02g3108 341 PRINTS Protein tyrosine phosphatase signature 137 157 IPR000242 GO:0004725|GO:0006470
Mibi02g3108 341 ProSiteProfiles PTP type protein phosphatase domain profile. 59 332 IPR000242 GO:0004725|GO:0006470
Mibi02g3108 341 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 40 334 IPR029021 -
Mibi02g3108 341 FunFam Tyrosine-protein phosphatase non-receptor type 12 36 340 - -
Mibi02g3108 341 Gene3D Protein tyrosine phosphatase superfamily 35 335 IPR029021 -
Mibi02g3108 341 SMART ptp_7 229 331 IPR003595 -
Mibi02g3108 341 Pfam Protein-tyrosine phosphatase 88 331 IPR000242 GO:0004725|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g3108 Mibi-ChrMibi02 55517421 55523401 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g3108 37 338 Protein tyrosine phosphatase (PTP) family AT1G71860 71.854 8.92e-167 466