Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g3104 ATGAACAAAAACAATCGGATTGAATCCATTCCGAAAATGGGTTCCCTTTCAATCCGATTCTCAACCTTCTCCGCCGTCTTCCTCGCCGTCATCGCCGCCGCCGCCGCCATATCTCCCGGCGCTACTCTCTTAGCTTCCAACACAAACCAAAGATGGTCTTCTCAGAACAACACATTCTCTCTCCATTTCCTTCCTTCAAATCCTCAAACTTCTCCTCCTACCTTCATCGCCGCCATCGTTTACTCCGGCGACACCCCAATCATCTGGTCCGCCGGAAATGGCGCCGCCGTTGACTCCGGCGGCTCCTTTCAGTTCCTCTCCAACGGAACCCTCCGCCTTGTAAATGGGTCCGGTTCAACCGTTTGGGATTCGAAAAGTTCAAATCTTGGTGTCTCCTCAGCTACTTTACAAGATGATGGCAATCTTGTTCTCTCAAATGGTACGGACACTGTGTGGTCAACGTTTGAGAATCCGACTGATACGATTGTTCCGTTGCAGAATTTCACTACTGGTATGGTTTTACGATCTGGGTTGTACTCGTTTAGTCTTATTTCTAGTGGGAATTTGACCCTCAAGTGGAATGATAGTATAGTGTATTGGAATCAGGGTTTGAATGCTTCTCTGAATGCGAAGTTGAATTCGCCTGTGTTGAGGTTGGAACCGACTGGGCTTTTGCGATTGAATGATTCTAATTTGTCATCTCCGGTTGTTATTGCTTATAGTAGTGATTATGCTGAGGGTAGTGATGTGTTGAGAACTTTGAAGATAGATAGTGATGGGAACCTGAGGATTTATAGTTCTTCAAGGGGTAGTGGGACTGTGAATTCAAGGTGGGCTGCTGTAGATCAGTGTGAGGTTTTTGGGTATTGTGGGAGCTATGGCATTTGCAGTTACAATGATACGGACCCAATCTGTGGGTGCCCGTCTCAGAATTTCGAGATGATTGATCCGAGTAACAGCCGAAAAGGATGTAAAAGGAAGGTGGATCTTGTTGATTGTCCTGGAAGTGCCACTATGTTACAATTGGACCATGCTCAGTTCTTGACCTATCCCCCTGAGCTGAGTTCCCAAATCTTTTTCATTGGTATATCAGCTTGTAGAGGTAATTGTCTTGCAGGTTCGACCTGCTTTGCTTCTACTTCATTATCGGATGGCACGGGACAGTGTTACATAAAATCATCAGATTTTATCAGTGGGTATCAAAATCCTGATCTGCCTAGCACTTCATATGTGAAGGTTTGTGGACCAGTGGCTCCAAACCCTCCAGCTTCCTTGGTTGGAGCCGGGCAGAAGAACCGTGGGAGGGTACCGGCTTGGATTGTGGTGATAGTAGTTTTGGGTACCCTTTTAGCTTTGACTGCCTTTGAAGGTGGCTTGTGGTTCTGGTGTTGCAGGAACAGAACAATATTAGGTGGCTTATCCGCACAATATGCTCTTCTTGAGTATGCTTCTGGTGCACCAGTCCAGTTTTCATACAAGGATCTCCAGCGGGCGACAAAGGGGTTTAAAGAGAAGCTTGGGGCTGGGGGTTTTGGTGCTGTGTATAGGGGAGTCCTTGCTAATAAAACTGTTGTTGCAGTGAAGCAACTTGAGGGAATTGAGCAAGGTGAGAAACAGTTCAGGATGGAAGTAGCTACCATAAGCAGCACTCATCATCTCAATTTGGTGAGGCTGATCGGTTTCTGCTCCGAAGGGCGCCACAGGCTTTTAGTGTATGAATTCATGAAGAACAGCTCGCTCGATAATCTCCTGTTTGTGACAGAAGATCAGTCAGGGAAATTGTTGAATTGGGAGTATCGCTTCAACATCGCCCTTGGAACTGCGAGGGGAATCACGTATCTTCATGAGGAGTGCCGAGACTGCATTGTCCATTGTGATATAAAACCTGAAAACATCCTCTTGAATGAGAATTACATCGCTAAAGTCTCAGATTTCGGCCTTGCCAAGCTCATAAATCCGAAAGACCACAGGCACCGAACTCTTACGAGTGTGAGAGGAACACGAGGATATCTAGCACCCGAATGGCTAGCTAATCTTCCCATAACTTCCAAATCTGATGTGTACAGCTATGGTATGGTTTTGTTGGAAATTGTGAGTGGAAGGAGGAACTTTGAATTGCTGGATGACAGAAACAGGAAAAAGTTCTCTGATTGGGCTTATGAAGAGTTTGAGAGAGGCAATATCATGGGAATACTTGATAAAAGAATGCGAGACCAAGAAGTTGATATGGATCAAGTACAAAGGGCAATTCAAGTAAGCTTCTGGTGCATCCAAGAGCATCCATCACATAGGCCAACAATGGGTCGAGTTGTGCAAATGCTTGAAGGGATAACCGAGATCGAGAAGCCACCTGCACCGAAATCCTCCATTGAAGGATCTGTCGGCGCAACAAGCACCTACTTGAGCAGCAATGCTAGTGCCTTTTCCACAGTTGCTGCCTCAGCCCCAGGTACTGCTTCATCTTCTTCATTCCATAACAGTGGTGTTTCAAGTTTGACTTCAGGAAAAAACACTGACAAGGCAACTTCCTCTCTTCTACAACAAGACCAATTGTAA 2556 0.4593 MNKNNRIESIPKMGSLSIRFSTFSAVFLAVIAAAAAISPGATLLASNTNQRWSSQNNTFSLHFLPSNPQTSPPTFIAAIVYSGDTPIIWSAGNGAAVDSGGSFQFLSNGTLRLVNGSGSTVWDSKSSNLGVSSATLQDDGNLVLSNGTDTVWSTFENPTDTIVPLQNFTTGMVLRSGLYSFSLISSGNLTLKWNDSIVYWNQGLNASLNAKLNSPVLRLEPTGLLRLNDSNLSSPVVIAYSSDYAEGSDVLRTLKIDSDGNLRIYSSSRGSGTVNSRWAAVDQCEVFGYCGSYGICSYNDTDPICGCPSQNFEMIDPSNSRKGCKRKVDLVDCPGSATMLQLDHAQFLTYPPELSSQIFFIGISACRGNCLAGSTCFASTSLSDGTGQCYIKSSDFISGYQNPDLPSTSYVKVCGPVAPNPPASLVGAGQKNRGRVPAWIVVIVVLGTLLALTAFEGGLWFWCCRNRTILGGLSAQYALLEYASGAPVQFSYKDLQRATKGFKEKLGAGGFGAVYRGVLANKTVVAVKQLEGIEQGEKQFRMEVATISSTHHLNLVRLIGFCSEGRHRLLVYEFMKNSSLDNLLFVTEDQSGKLLNWEYRFNIALGTARGITYLHEECRDCIVHCDIKPENILLNENYIAKVSDFGLAKLINPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFELLDDRNRKKFSDWAYEEFERGNIMGILDKRMRDQEVDMDQVQRAIQVSFWCIQEHPSHRPTMGRVVQMLEGITEIEKPPAPKSSIEGSVGATSTYLSSNASAFSTVAASAPGTASSSSFHNSGVSSLTSGKNTDKATSSLLQQDQL 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g3104 851 CDD STKc_IRAK 506 777 - -
Mibi02g3104 851 SMART serkin_6 500 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g3104 851 ProSitePatterns Serine/Threonine protein kinases active-site signature. 622 634 IPR008271 GO:0004672|GO:0006468
Mibi02g3104 851 FunFam S-receptor-like serine/threonine-protein kinase 474 574 - -
Mibi02g3104 851 Gene3D Phosphorylase Kinase; domain 1 473 574 - -
Mibi02g3104 851 ProSiteProfiles Bulb-type lectin domain profile. 28 157 IPR001480 -
Mibi02g3104 851 Pfam S-locus glycoprotein domain 246 308 IPR000858 GO:0048544
Mibi02g3104 851 ProSiteProfiles Protein kinase domain profile. 500 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g3104 851 Pfam D-mannose binding lectin 88 169 IPR001480 -
Mibi02g3104 851 ProSiteProfiles Bulb-type lectin domain profile. 159 277 IPR001480 -
Mibi02g3104 851 SUPERFAMILY alpha-D-mannose-specific plant lectins 86 204 IPR036426 -
Mibi02g3104 851 Gene3D - 156 280 IPR036426 -
Mibi02g3104 851 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 575 784 - -
Mibi02g3104 851 SUPERFAMILY Protein kinase-like (PK-like) 483 775 IPR011009 -
Mibi02g3104 851 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 33 157 - -
Mibi02g3104 851 Gene3D Transferase(Phosphotransferase) domain 1 575 789 - -
Mibi02g3104 851 Pfam Protein kinase domain 503 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g3104 851 PANTHER OS07G0415500 PROTEIN 20 786 - -
Mibi02g3104 851 SMART blect_4 43 158 IPR001480 -
Mibi02g3104 851 MobiDBLite consensus disorder prediction 811 851 - -
Mibi02g3104 851 ProSitePatterns Protein kinases ATP-binding region signature. 506 528 IPR017441 GO:0005524
Mibi02g3104 851 PIRSF SRK 9 832 IPR024171 GO:0004674
Mibi02g3104 851 Gene3D - 30 155 IPR036426 -
Mibi02g3104 851 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 158 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g3104 Mibi-ChrMibi02 55449515 55452070 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g3104 473 784 Receptor kinase-like Gene Family AT5G20050 44.615 3.11e-81 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Mibi02g3104 Pkinase 1.6e-51 CL0016