Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g3077 ATGCAACCACTCACCACCACTACCACCACCGTCACCGCCACCGCCACCACTCCGGCGACCTACCGTGGTGTTCGCATGCGAAAATGGGGCAAATGGGTATCCGAAATCCGAGAACCCGGCAAGAAAACCCGGATATGGCTAGGAAGTTATGACACACCAGAGATGGCTGCAGCCGCATATGACGTGGCGGCGTTACATTTCCGGGGCCAAGCCGCCCGGCTCAACTTCCCGGAGCTCGCCGGAAGCCTTACAGGGCCGGCGAGTTCCCGAGCGGAGGATGTGCAGTTGGCAGCACATCAGGCAGCACTGAAGTTAAAGAGACCGTTGACCAGAAGGCCGTCCGGGGAGACAGGTGGCGGTGATACGGTGGTGGGGCCGCCGGTGACGGTGGGGCTGTCACCGAGTCAAATTCAGGCTATAAATGAGTCACCATTGGATTCACCAAAGATGTGGATGCAAATGGCTGCTGAGGCTGCTCTTATACTTGGGTTTGATGTTTTGTGTAATGATGATGAGGATGATTATGATGAAGAGTTAGAAGAAACTCAGCCTCATGAATCTGTATTATGGAACTTCTAA 579 0.5458 MQPLTTTTTTVTATATTPATYRGVRMRKWGKWVSEIREPGKKTRIWLGSYDTPEMAAAAYDVAALHFRGQAARLNFPELAGSLTGPASSRAEDVQLAAHQAALKLKRPLTRRPSGETGGGDTVVGPPVTVGLSPSQIQAINESPLDSPKMWMQMAAEAALILGFDVLCNDDEDDYDEELEETQPHESVLWNF 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g3077 192 SUPERFAMILY DNA-binding domain 20 78 IPR016177 GO:0003677
Mibi02g3077 192 Pfam AP2 domain 21 69 IPR001471 GO:0003700|GO:0006355
Mibi02g3077 192 SMART rav1_2 20 83 IPR001471 GO:0003700|GO:0006355
Mibi02g3077 192 FunFam Ethylene-responsive transcription factor 2 19 78 - -
Mibi02g3077 192 ProSiteProfiles AP2/ERF domain profile. 20 77 IPR001471 GO:0003700|GO:0006355
Mibi02g3077 192 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 16 125 - -
Mibi02g3077 192 Gene3D AP2/ERF domain 20 78 IPR036955 GO:0003700|GO:0006355
Mibi02g3077 192 CDD AP2 21 79 IPR001471 GO:0003700|GO:0006355
Mibi02g3077 192 PRINTS Ethylene responsive element binding protein signature 21 32 IPR001471 GO:0003700|GO:0006355
Mibi02g3077 192 PRINTS Ethylene responsive element binding protein signature 43 59 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g3077 Mibi-ChrMibi02 54690274 54690852 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g3077 18 153 AP2-EREBP Transcription Factor Family AT1G71450 58.088 1.92e-48 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi02g3077 AP2 1.3e-13 CL0081