Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g3069 ATGTCTCTGGTTAATTTAAACTTCCAGCCTGAACATATTCATCAAAATAGGAATGGCAATCTGGATGGGCTTTTACATGTGATCATAAAATATAAAGCTCTATTTGTGATTCCATTTTGTAGTATGCTTGCTTATTCTTTTGTGTTTCAAACTTCTGTGGGCCTAAATTTTGGGATAGGTTACCAAAAGCTGTTCTGCTTTCAGCTTTTGGCATTACACCATTTCATCCGTCACTCTGCTCATCTAGCCGCTAGGTTTTTCCGCATCTGCTCTCTCCTCTACAATTCCACAATGGTTGCCGCCAAGAAGACGAAGAAGACCCATGAGAGCATTAACAACAGGCTCGCTCTTGTTATGAAGAGTGGGAAGTATACCCTGGGTTACAAGACGGTGCTCAAATCCCTTAGGAATTCTAAAGGAAAATTGATTATCATTGCCAACAATTGTCCACCTTTGAGAAAGTCAGAAATTGAGTACTATGCCATGTTGGCTAAAGTTGGAGTTCACCATTACAATGGAAACAACGTAGATTTGGGCACAGCATGCGGGAAATATTTCAGAGTGTGCTGCCTCAGCATTATTGATCCTGGTGATTCGGATATTATCAAGACAATGCCTGGCGAGCAGTAA 630 0.4095 MSLVNLNFQPEHIHQNRNGNLDGLLHVIIKYKALFVIPFCSMLAYSFVFQTSVGLNFGIGYQKLFCFQLLALHHFIRHSAHLAARFFRICSLLYNSTMVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKSLRNSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVCCLSIIDPGDSDIIKTMPGEQ 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g3069 209 FunFam 60S ribosomal protein L30 99 205 - -
Mibi02g3069 209 Hamap 50S ribosomal protein L30e [rpl30e]. 109 206 IPR000231 GO:0003723|GO:0003735|GO:0022625
Mibi02g3069 209 ProSitePatterns Ribosomal protein L30e signature 2. 177 197 IPR022991 -
Mibi02g3069 209 PANTHER RIBOSOMAL PROTEIN L30 98 207 IPR039109 GO:0003723
Mibi02g3069 209 ProSitePatterns Ribosomal protein L30e signature 1. 121 145 IPR022991 -
Mibi02g3069 209 SUPERFAMILY L30e-like 110 203 IPR029064 -
Mibi02g3069 209 Gene3D - 99 205 IPR029064 -
Mibi02g3069 209 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 110 202 IPR004038 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g3069 Mibi-ChrMibi02 54583550 54587380 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g3069 98 209 Cytoplasmic Ribosomal Protein Gene Family AT1G36240 86.607 5.70e-71 209