Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g3044 ATGAATGCTTCTGATCGTTTTCCCCATTGTTTATTCTTCTTCCTTCTGCTCCTATTTTTCTTTATAACTATTTGTGCCTATGATGATAGCTTCAAAAACTGCAGTAGCCTGTTCAATTGTGGAAACATCAATAATATTGGCTATCCATTTTGGGGATATAACAGAGCTGAATATTGTGGTCAACCTGGTTTCCAACTTACTTGCCAAGACAATACACCAAAGTTGTTGGTAAACTCTGTCACTTATCGGATTCTGAGTTTGAGCCTCAAAGATCAGAATCTCACAGTGGCTAGGGATGACTATTGGAATAATATATGTCCAAGTCAATACACAAATACTAGTTTTGATTCCACCATGTTCAAGCTTAATGATGGGTTTCAAAATATGGGCTTTCTATATGATTGCATAAGCACTTTTAATCCATCAGTTGTTCAGTTAATACCTTCATCTACAGAGTGCTCCTCCACTGGTAGTAGTGGTTCGAAGCGAAACGTATACTATGGGATCATATCTAATGGCGTGGATTTGACAGGAATTTGCAAGGTTGTTGTTATTCCTGTACTGAATATCTATGTTGGTTTGGTAATGTCACGTCAAAAAGGAATTGAATATGCAATAGAGGAAGGTTTTGGATTGACATGGAGTGTAGATAATGATGAGTGCAACAAGTGTGTCAAGTCTGGGGGGAAGTGTGGGTATATGAATCAGAAATTCACATGTTTCTGCGGAGACGGGCGTAAAGGAGCTACTTGTTCTTCAGATAAAAGCTCTAACAAGGCAGTTGCTATAGGTGCTGGTGTTGGAGTTGGAGCTTTTTGTGGCGTTATTATTCTATGTTTGTTGTGCTTGGTCATGAAACGAAGGAAAAGAAAAGTTGAACAGTCGAAAAGCAATAAGAACCTCTTGTCACCATCATTAAGCACTATTAGTGGCGATGTAACAACAACCTCTACAACTAAAACTAGTATTGCTCAAAGTTCTCCTTCTTATCATTCCTCCAAGTTCGAATCTGTGCAGAAGAGTTTTTACTTTGGTGTTCAGGTTTTTAGCTATGATGAACTTGAAGAAGCTACCAAAAATTTTGACTCTTCCATGGAACTTGGTGATGGAGGCTTCGGAACTGTTTACTATGGAACTCTAAAAGATGGACGAGTAGTTGCAGTAAAACGCCATTATGAAACCAATGCTAAACGTGTAGATCAGTACATGAATGAAGTGGAGATTCTAGCTCGATTGCGACATGACAACCTTGTAGCTCTTTATGGATGCACATCCAGACACAGTCGAGAACTCATCCTTGTCTATGAATACATTCCTAATGGAACAGTAGCCGACCACCTTCATGGCAAAAGATCTCAATCATCTTTGCTTTCTTGGCCTACACGTATGAACATTGCAGTAGAAACAGCCGAAGCCTTGGCTTACCTTCACAAATCCGATGTCATACACCGCGATGTCAAGACCAACAACATCCTCCTAGATGAAAATTTTCGAGTTAAGGTTGCTGATTTTGGCCTTTCACGTTTGTTCCCTAACCATGTCACACATGTTTCTACAGCCCCACAAGGGACACCTGGTTATGTTGATCCTGAGTATTACCAGTGCTTCCAATTAACCGATAAGAGTGATGTTTATAGCTTTGGAGTAGTTTTGATCGAGCTCATATCGTCATTACAAGCAGTGGATATTTCGAGGAGTCATCGTGACATAAACTTGGCCAACATGGCGGTTGATAAGGTTCAGAGCAATGCAGTGCATGAGTTGGTTGATCCATATTTAGGGTTTGAAATGGATGATTCTGTGAGGAAGATGATTATAGGAGTAGCAGAATTAGGCTTCAGGTGTTTGCAGAAGGAGAGAGACATGAGGCCCTCCATGAAAGAGGTGGTTGAGGTGTTGAGGGAGATTCAGGGTAGTAAGGAGTATGATAATGAAAAGGAAAATAATAGTAATAATAAAGAAGTGGTGATGATGATGGATAAGGCAGAAGAAATGGTGCTTTTGAAAAATGGCAGTGCACCAGCTTCACCAAATTCAGTTTCTGATAAATGGGTTAGCTTCTCTTCTGCGTCTAATTCCTCGCAGAATCTATTATCTCCTTTTTCTGTTGGTAGAGCATAG 2121 0.3998 MNASDRFPHCLFFFLLLLFFFITICAYDDSFKNCSSLFNCGNINNIGYPFWGYNRAEYCGQPGFQLTCQDNTPKLLVNSVTYRILSLSLKDQNLTVARDDYWNNICPSQYTNTSFDSTMFKLNDGFQNMGFLYDCISTFNPSVVQLIPSSTECSSTGSSGSKRNVYYGIISNGVDLTGICKVVVIPVLNIYVGLVMSRQKGIEYAIEEGFGLTWSVDNDECNKCVKSGGKCGYMNQKFTCFCGDGRKGATCSSDKSSNKAVAIGAGVGVGAFCGVIILCLLCLVMKRRKRKVEQSKSNKNLLSPSLSTISGDVTTTSTTKTSIAQSSPSYHSSKFESVQKSFYFGVQVFSYDELEEATKNFDSSMELGDGGFGTVYYGTLKDGRVVAVKRHYETNAKRVDQYMNEVEILARLRHDNLVALYGCTSRHSRELILVYEYIPNGTVADHLHGKRSQSSLLSWPTRMNIAVETAEALAYLHKSDVIHRDVKTNNILLDENFRVKVADFGLSRLFPNHVTHVSTAPQGTPGYVDPEYYQCFQLTDKSDVYSFGVVLIELISSLQAVDISRSHRDINLANMAVDKVQSNAVHELVDPYLGFEMDDSVRKMIIGVAELGFRCLQKERDMRPSMKEVVEVLREIQGSKEYDNEKENNSNNKEVVMMMDKAEEMVLLKNGSAPASPNSVSDKWVSFSSASNSSQNLLSPFSVGRA 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g3044 706 FunFam receptor-like protein kinase FERONIA 322 437 - -
Mibi02g3044 706 SMART serkin_6 361 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g3044 706 CDD STKc_IRAK 367 636 - -
Mibi02g3044 706 ProSiteProfiles Protein kinase domain profile. 361 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g3044 706 ProSiteProfiles EGF-like domain profile. 217 252 IPR000742 -
Mibi02g3044 706 FunFam Wall-associated receptor kinase-like 20 438 646 - -
Mibi02g3044 706 SUPERFAMILY Protein kinase-like (PK-like) 340 637 IPR011009 -
Mibi02g3044 706 Pfam Wall-associated receptor kinase C-terminal 171 245 IPR032872 -
Mibi02g3044 706 Gene3D Transferase(Phosphotransferase) domain 1 438 664 - -
Mibi02g3044 706 ProSitePatterns EGF-like domain signature 1. 240 251 IPR000742 -
Mibi02g3044 706 ProSitePatterns Protein kinases ATP-binding region signature. 367 389 IPR017441 GO:0005524
Mibi02g3044 706 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 11 689 IPR044652 GO:0004672
Mibi02g3044 706 Pfam Wall-associated receptor kinase galacturonan-binding 34 98 IPR025287 GO:0030247
Mibi02g3044 706 Pfam Protein kinase domain 363 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g3044 706 Gene3D Phosphorylase Kinase; domain 1 332 437 - -
Mibi02g3044 706 ProSitePatterns Serine/Threonine protein kinases active-site signature. 481 493 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g3044 Mibi-ChrMibi02 53531467 53535935 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g3044 38 694 Receptor kinase-like Gene Family AT1G25390 41.504 3.33e-151 451
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Mibi02g3044 Pkinase 1.1e-47 CL0016