Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g3027 ATGGCTTTGCAAAACATTGGAGCTGGAAACAGTGATGATGCCTTCTACAGGTATAAGATGCCCAAAATGATTACCAAAATTGAGGGCAGAGGCAATGGTATCAAAACCAACATAGTGAATATGGTTGATATTGCAAAGGCATTGGCAAGGCCAGCTTCTTACACAACCAAGTATTTTGGCTGTGAGCTTGGAGCTCAATCCAAATTTGACGAGAAAACTGGGACTTCTCATGTTAATGGAGCCCATGATACTCCAAAACTTGCTGGTCTTCTGGAGAACTTCATCAAGAAATATGTCCAGTGCTACGGTTGCGGGAATCCTGAAACTGATATCTTGATCACCAAGAGTCAAATGATCCAGCTGAAATGTGCTGCCTGTGGGTTTGTGTCAGATGTGGATATGAGAGACAAGCTGACCACCTTTATTATTAAGAATCCTCCTGAAGCCAAGAAAGGGTCCAAAGACAAGAAGGCCATGAGGAGAGCTGAGAAGGAGAGACTGAAAGAAGGTGAAGCAGCTGATGAAGAAATGAAAAAATTAAAAAAGGAGGTGAAGAAGAAGGGTTCTTCCTCTTCCAAGGATGGAACTACTAAATCTAAAAAGAAATCCAACAGCTCTGATGAAGACCGCTCATCGCCTCCTCGTGGTAAGATTCCTGAGGAGCCTCATGTTGAAGCGGAGGAAGATGACGGCGATGATGTTCAATGGCAAACAGATACATCACTGGAGGCTGCTCGCCAACGTATTCAGGAACAATTAAGTGCCGTGACAGCTGATATGGTTATGCTCTCCACTGATGAGCGAGAGAAGAAGGCAAAAGAAGCTAGCAAGGTAAATGGTGCGTCTGAGAATGGGAAATCAGTGCCATACGCGTCTCTTGTTGAGGAAATCAAATCTGATTTGCAGAGAGGCGTAACTGCACAGGAGCTGCAGCACCATTTAGCAGCCCTTACTGCATCTCCACAGGAAAAAATGATTGCTTTGTACGAGGCCCTCGTTACTGGTGTTGAGAAAGGATTCGCCAAGGAGGTCATCAAGAAGAGAAGCTATCTTGCTGCTGCTCTTGCTGGGGAAGAAGGATCACAGATGCTGTTACTGCATGCAATTGAGGACTTCTGTTGCAAGACCGGTGCCAATGCTTTGAAGGAGGTCGCCTTAGTTTTGAAGGCTTTGTACGATGCTGATGTGCTGGAGGAGGAGTACATAGTGCAATGGTATCAGATAGGGCTCAAGGGAGACTCCAAAGACACTAAGATATGGAAGAATGTTCAACCATTCATTGATTGGCTTCAGAGTGCAGAATCAGAATCAGAGGAAGAGTAA 1323 0.4497 MALQNIGAGNSDDAFYRYKMPKMITKIEGRGNGIKTNIVNMVDIAKALARPASYTTKYFGCELGAQSKFDEKTGTSHVNGAHDTPKLAGLLENFIKKYVQCYGCGNPETDILITKSQMIQLKCAACGFVSDVDMRDKLTTFIIKNPPEAKKGSKDKKAMRRAEKERLKEGEAADEEMKKLKKEVKKKGSSSSKDGTTKSKKKSNSSDEDRSSPPRGKIPEEPHVEAEEDDGDDVQWQTDTSLEAARQRIQEQLSAVTADMVMLSTDEREKKAKEASKVNGASENGKSVPYASLVEEIKSDLQRGVTAQELQHHLAALTASPQEKMIALYEALVTGVEKGFAKEVIKKRSYLAAALAGEEGSQMLLLHAIEDFCCKTGANALKEVALVLKALYDADVLEEEYIVQWYQIGLKGDSKDTKIWKNVQPFIDWLQSAESESEEE 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g3027 440 Gene3D - 286 440 - -
Mibi02g3027 440 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 439 IPR045196 GO:0003743|GO:0006413
Mibi02g3027 440 Pfam eIF4-gamma/eIF5/eIF2-epsilon 362 440 IPR003307 GO:0005515
Mibi02g3027 440 SMART eIF2Bneu4 15 129 IPR002735 GO:0003743|GO:0006413
Mibi02g3027 440 Gene3D - 105 145 - -
Mibi02g3027 440 CDD W2_eIF5 287 433 - -
Mibi02g3027 440 FunFam Eukaryotic translation initiation factor 5 105 145 - -
Mibi02g3027 440 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 10 101 IPR016189 GO:0003743|GO:0006413
Mibi02g3027 440 Gene3D - 3 104 - -
Mibi02g3027 440 FunFam Eukaryotic translation initiation factor 5 1 104 - -
Mibi02g3027 440 ProSiteProfiles W2 domain profile. 280 440 IPR003307 GO:0005515
Mibi02g3027 440 SMART 542_3 349 436 IPR003307 GO:0005515
Mibi02g3027 440 MobiDBLite consensus disorder prediction 148 224 - -
Mibi02g3027 440 MobiDBLite consensus disorder prediction 146 233 - -
Mibi02g3027 440 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 98 133 IPR016190 GO:0003743|GO:0006413
Mibi02g3027 440 SUPERFAMILY ARM repeat 290 434 IPR016024 -
Mibi02g3027 440 Pfam Domain found in IF2B/IF5 11 127 IPR002735 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g3027 Mibi-ChrMibi02 53165513 53166835 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g3027 1 433 Eukaryotic Initiation Factors Gene Family AT1G36730 64.480 0.0 520