Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g3005 ATGTCCTTGAGCTCTAAACCCAGAAACGTATCCTCATTCATTCTTCAATCTGAGCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCTCTCATAATGGAAACCAAGGATTCAAAGAGTGGTTTCTGCTCAGATTCCAGAACCTTCCACAGCCTCAGACCTCCCATTCATCTTCCTCCTCCAGACGTTCCTCTCTCAGCTTCCCACTTCGCCCTCTCCCTCCAACTCAACAACAACAACAACTCCAACTCATCACTCCCCGCCCTCATCGACTCCGTCTCCGGCCACCGAGTGTCCTTCTCCGACTTCATCCTTTCCTCACAGACCCTATCCTCCAACCTCTATAACCTCTTTGGCCTCTCCAAAGGCCACACCGCCTTCGTATTGTCCCCAAATCTCACCAACATCCCCATCCTCTACTTCTCCCTTCTCTCCCTCGGTGCCGTCGTCTCCCCCGCCAATCCCACCGCCACTCCCCCCGAGATCTCCCACCTCTTCCGCCTATCCTCCCCGGCGATTGCGTTTGCAACTTCCTTTACCGCACGGAACCTTCCGTACATTCCCCGGCTCGGGCTCATCCTCCTCGACTCTCCCGAGTTTGACTCGCTCATGACGACGCCGACGACGACAACCAAACCGGTGGTCCCGGAGGTGAACCAATCGGACGTAGCGGCGATATTGTACTCCTCCGGGACCACGGGGAAGGTGAAGGGAGTGATGCTGACTCACCGGAATCTGATTTCGTCGGCGGCGAGTTACGACGCGACTCGGTCTCGGAGGGAGAAGCCGGCGGTTTTGCTGTATACGGTGCCGTACTTCCATGTGTACGGATTCACGTACTGTTTGAGGTCGGTGGTGTTGTCGGAGACGGTGGTGATGATGGAGAGGTTTGGGGTGGAGAGGATGTTGGCGGCGGTGGAGGAGTTCGGAGTCACTCACCTCGTGGCGGCGCCGCCTGTGGTGGTGGCCATGGCCAAGAGAGATGTAACGGACGGCTATGATTTAACGTCGTTGGAAGGCGTCATTTGTGGGGCGGCTCCGCTTGGAAACGACGTCGCTGTCGCTTTCAGATCGAAGTTCCCCAGAGTATTGCTTGTTCAGGGATATGGGTTAACAGAAACAACGGCATCGATCTGTCGAACCATGGGAGAAGAGGAGACCAATAAAACAGGGACAACTGGGAAGCTATTAGCAGGAGTTGAAGCCAAAATCGTGGACCCACTCACTGGACTGGCCTTGTCTCCTGGTCAACAAGGAGAACTTTGGCTTAAAGGACCTCCTATAATGAAAGGTTATGTAGGGGATCCAGAAGCAAACTCGGCGACATTCATTGACGGGTGGTTGAGGACAGGAGACTTGTGCTATTTTGACCACCAAGGCTACCTCTACGTTGTTGATAGATTGAAAGAATTGATCAAATACAAAGGACACCAGGTGGCTCCTGCAGAGCTGGAAAATTTGCTTCAGTCCCATCCACAGATCCAGGATGCTGCAGTTATTCCTTACCCTGATGAAGAAGCAGGGCAGGTGCCTATGGCCTTTGTGGTGAGACAACCTAACAGTTCACTTAGCAAAGTGGACGTAATTGATTTTGTTGCCAAACAGGTTGCACCTTACAAGAAAATAAGGCGAGTTTTATTTGTCACTTCCATACCAAAGAATGCGGCAGGAAAAATTCTGAGGAAAGAATTGAGTAAATCTGTCCTCCATCAATCTATATCTAAATTGTAA 1731 0.5199 MSLSSKPRNVSSFILQSEPLSLSLSLSLSSLIMETKDSKSGFCSDSRTFHSLRPPIHLPPPDVPLSASHFALSLQLNNNNNSNSSLPALIDSVSGHRVSFSDFILSSQTLSSNLYNLFGLSKGHTAFVLSPNLTNIPILYFSLLSLGAVVSPANPTATPPEISHLFRLSSPAIAFATSFTARNLPYIPRLGLILLDSPEFDSLMTTPTTTTKPVVPEVNQSDVAAILYSSGTTGKVKGVMLTHRNLISSAASYDATRSRREKPAVLLYTVPYFHVYGFTYCLRSVVLSETVVMMERFGVERMLAAVEEFGVTHLVAAPPVVVAMAKRDVTDGYDLTSLEGVICGAAPLGNDVAVAFRSKFPRVLLVQGYGLTETTASICRTMGEEETNKTGTTGKLLAGVEAKIVDPLTGLALSPGQQGELWLKGPPIMKGYVGDPEANSATFIDGWLRTGDLCYFDHQGYLYVVDRLKELIKYKGHQVAPAELENLLQSHPQIQDAAVIPYPDEEAGQVPMAFVVRQPNSSLSKVDVIDFVAKQVAPYKKIRRVLFVTSIPKNAAGKILRKELSKSVLHQSISKL 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g3005 576 Pfam AMP-binding enzyme 81 474 IPR000873 -
Mibi02g3005 576 CDD 4CL 54 564 - -
Mibi02g3005 576 SUPERFAMILY Acetyl-CoA synthetase-like 87 569 - -
Mibi02g3005 576 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 42 566 - -
Mibi02g3005 576 FunFam 4-coumarate--CoA ligase 2 470 571 - -
Mibi02g3005 576 Gene3D - 61 469 IPR042099 -
Mibi02g3005 576 Pfam AMP-binding enzyme C-terminal domain 483 558 IPR025110 -
Mibi02g3005 576 Gene3D - 470 572 IPR045851 -
Mibi02g3005 576 ProSitePatterns Putative AMP-binding domain signature. 226 237 IPR020845 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g3005 Mibi-ChrMibi02 52810736 52819083 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g3005 37 576 Monolignol Biosynthesis Gene Families AT5G63380 50.181 0.0 541