Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g2971 ATGGGGAAGCCCATAACACAGACTCTTCTCTGTTTCATGACACTTATTGTCTGGTTTTCTTGTTCTTATTCTACAAATGCTTTGCTCTCTCCTAAAGGAGTGAACTTTGAAGTTCAAGCTTTGATGGGTATAAAAGCTTCTCTGGTTGATCCTCATGGAGTTTTAGATACTTGGGATGGAGATTCTGTTGATCCTTGTAGCTGGACCATGGTCACTTGTTCTTCTGACAACCTTGTTGTTAGCCTGGGCGCTCCAAGTCAAAGCTTATCTGGTACTTTGTCTCCCTCCATAGGAAACCTCACAAACCTTCAGACTCTTTTGTTACAGAATAATAACATCACAGGTACAATTCCTTCAGAACTAGGGAAGCTTTCAAAGCTTGAAACTTTAGATCTGTCAAATAACTTGTTCAATGGGAAAATTCCTTCCTCTTTAGGCCACATGAGCAAGCTGCTATACTTGAGGCTCAATAATAATAGTCTATCTGGTGAATGTCCAGAGTCACTGGCCAATAAGACACAGCTTGCTTTTCTTGACTTGTCCTACAACAATCTCAGTGAGCCTGTGCCCAGAATTCTGGCCAAATCATTCAGCATTGTTGGAAATCCCCTGATCTGTGGTACTGGGAAAGAAGCAGCCTGCCATGGGATGACATTGATGCCTATGTCCATGAACTTAAACAATACCCAACAAGATGATCAACCTTCTGGCAGACAAAAGACACACAGAGTGGCGATTGCCTTTGGTTTGAGCCTAGGATGTCTCTGTCTCATTGTTGTTTGTTTTGGACTATTTCTCCTATGGAGGCATAAGCATAAACAACAAGCATTCTTTGATGTCAAAGATCGTCATCATGAGGAAGTTTACTTGGGGAACTTGAAGAGGTTCCATTTCAGGGAGCTGCAGAATGCTACAAACAATTTCAGCAGCAAGAACATATTAGGAAAAGGCGGGTTTGGACATGTGTACAAGGGAGTTCTTCAAGATGGAACAGTGGTGGCAGTGAAGAGGCTAAGAGATGGGAATGCCATTGGAGGAGAAATACAGTTTCAGACTGAAGTTGAGATGATAAGCTTGGCTGTACACAGAAACCTCCTTAGACTCTATGGTTTCTGTATGACTCCCACTGAAAGGCTTCTTGTCTACCCTTATATGCCTAATGGCAGTGTTGCTTCTCGCCTCAAAGGAAAACCAGTATTGGATTGGGGGACAAGGAAGCAGATAGCATTAGGAGCAGCAAGGGGGCTATTATACCTGCATGAGCAGTGTGACCCAAAGATAATACATAGGGATGTGAAAGCAGCAAACATATTGCTTGATGAGTACTATGAGGCAGTGGTTGGAGATTTTGGATTGGCAAAGCTTTTGGATCATCAAGACTCTCATGTGACTACTGCTGTGAGGGGTACTGTAGGCCACATTGCACCTGAATACCTCTCCACTGGTCAGTCCTCTGAGAAGACTGATGTCTTTGGATTTGGCATACTCCTTCTTGAGTTGATCACTGGTCTTAGGGCTCTTGACTTTGGAAAAGCTTCCAACCAGAAAGGAGCCATGCTTGATTGGGTGAAGAAAATTCATCAAGAGAAGAAACTAGAACTGCTAGTGGACAAGGATTTGAAGAGCAACTATGACAGAATAGAGCTAGAAGAAATGGTGAAAGTGGCACTTTTGAGTACTCAATACCTTCCAGGACAGAGACCTAAAATGTCAGAAGTAGTGAGAATGCTTGAAGGAGATGGACTTGCAGAGAGATGGGAAGCTTCTCAAAGTAGAGATCATAATGACACAAGCAAATCATCCAACAAACATGCCCATCAATTCTCTTCATCAGATCGCTATTCTGATCTCACTGATGACTCGTCTTTGTTAGTCCAAGACATGGAGCTTTCTGGCCCAAGGTGA 1905 0.4299 MGKPITQTLLCFMTLIVWFSCSYSTNALLSPKGVNFEVQALMGIKASLVDPHGVLDTWDGDSVDPCSWTMVTCSSDNLVVSLGAPSQSLSGTLSPSIGNLTNLQTLLLQNNNITGTIPSELGKLSKLETLDLSNNLFNGKIPSSLGHMSKLLYLRLNNNSLSGECPESLANKTQLAFLDLSYNNLSEPVPRILAKSFSIVGNPLICGTGKEAACHGMTLMPMSMNLNNTQQDDQPSGRQKTHRVAIAFGLSLGCLCLIVVCFGLFLLWRHKHKQQAFFDVKDRHHEEVYLGNLKRFHFRELQNATNNFSSKNILGKGGFGHVYKGVLQDGTVVAVKRLRDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFCMTPTERLLVYPYMPNGSVASRLKGKPVLDWGTRKQIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGLRALDFGKASNQKGAMLDWVKKIHQEKKLELLVDKDLKSNYDRIELEEMVKVALLSTQYLPGQRPKMSEVVRMLEGDGLAERWEASQSRDHNDTSKSSNKHAHQFSSSDRYSDLTDDSSLLVQDMELSGPR 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g2971 634 Gene3D Transferase(Phosphotransferase) domain 1 385 597 - -
Mibi02g2971 634 FunFam Somatic embryogenesis receptor kinase 1 277 384 - -
Mibi02g2971 634 ProSitePatterns Protein kinases ATP-binding region signature. 314 336 IPR017441 GO:0005524
Mibi02g2971 634 ProSitePatterns Serine/Threonine protein kinases active-site signature. 427 439 IPR008271 GO:0004672|GO:0006468
Mibi02g2971 634 MobiDBLite consensus disorder prediction 602 625 - -
Mibi02g2971 634 Gene3D Ribonuclease Inhibitor 34 216 IPR032675 -
Mibi02g2971 634 MobiDBLite consensus disorder prediction 585 601 - -
Mibi02g2971 634 SUPERFAMILY Protein kinase-like (PK-like) 285 578 IPR011009 -
Mibi02g2971 634 FunFam Somatic embryogenesis receptor-like kinase 1 385 597 - -
Mibi02g2971 634 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
Mibi02g2971 634 Gene3D Phosphorylase Kinase; domain 1 277 384 - -
Mibi02g2971 634 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 18 588 - -
Mibi02g2971 634 Pfam Leucine Rich repeats (2 copies) 101 141 IPR025875 -
Mibi02g2971 634 Pfam Leucine rich repeat N-terminal domain 37 74 IPR013210 -
Mibi02g2971 634 SUPERFAMILY L domain-like 37 199 - -
Mibi02g2971 634 FunFam Putative LRR receptor-like serine/threonine-protein kinase 34 216 - -
Mibi02g2971 634 Pfam Protein kinase domain 309 540 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g2971 634 ProSiteProfiles Protein kinase domain profile. 308 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g2971 634 MobiDBLite consensus disorder prediction 585 634 - -
Mibi02g2971 634 SMART serkin_6 308 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g2971 Mibi-ChrMibi02 52333501 52338605 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g2971 5 634 Receptor kinase-like Gene Family AT5G16000 75.671 0.0 963
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Mibi02g2971 Pkinase 4.2e-43 CL0016