Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g2959 ATGGAAGACGAAGAAGAAGATCAGCTTCAACGGCAACCTCGAGGATCCATGGCAGTTCCAATTCAAGGTATGGAGTCTGTGGTGGCGACAGTGAGTGGCTATCATGGAACAGAGCGATTCAACCTTATCAAGTTGATTTCACATGCTGGTGCTAATTATGTTGGTGCAATGTCGCGATCGATCACGCACCTGATTTGTTGGCGATTCGAAGGAAAGAAATATAGTCTTGCTCGGAAGTTCAGAACAGTTATAGTAAATCACCAGTGGATTGAAGATTGTTTAAAGCAAGGAAGGCGTGTTCCAGTGGAACCTTATAAATTGAAAAGTGGAGCAGAGGTGGGGCCAATTTCGCTGCAAGTTCCACTTATTGCTCTGGAAAGTAACTTGATTGAGAATAATGTGCTTAAACATGGATCAGATGACGTTGTCTCCATAAGTCAAACAACTGACATCAGTTTTGGAGCTTCTGGAAATCTTGTTAGTGAAGATTCTTATTTTATGAACGAGGAGGAGCTAGTAACTTTTTCTTCCAGACAGTCAAGGAATGGAAAAAGAAAGATCTCCAATAGTAATAGGGTGACACCTTCTGCTGGTCCTTCCCGTCACAGAAGAAGGCTGGTGAAAAGGAATGTTCAAGAAGTTTCAGCTTCTTTACTTGATTTTAACTCTGAGGAGTACCTTAACGGAATGGATAGATTTAATACTGATGTTGTGGCTTCCTCTAGCCTTTCTGGTGGTGTCTCTACTGATATTATTTTAGAAGATAGAGAAGGATCCGATATTGACTCATATAATCAAAACTTAGCCAACAATGCAGCATCAAATGCTACTGAACAAATCAAAGATTCAAAATATTTTTCAAGTTCAAAAATTACAACTCGATGTGTACAAGATGCCTTGCCTACTGCTGAGCAAATATCCGTGGACAAGTGTTTTGAAAAGTCTGCCGATGGTATTCAGGAAGGTCATGCGGCTGACTTACGTACATCGACAGAGTTGTCATGTGTCATATGTTTGACGGAATTCAGCTCAACACGAGGGGTTTTGCCATGTGGACATAGGTTTTGTTACTCTTGTATCCAGAGTTGGGTAGATCACAGGACTGCAATGGGAAAAGTCTCAACGTGCCCCTTGTGCAAGTCAAGGTTTGACAGCATCATGAAGTACGAGGACTTGGCTGTGGATCAAAAGATATATTCCCAAACAATCCCATGCGGCATTCCAATCTCAGATATGATTTTACTTATGGATCGGGAACAACCAAATTATGGTTTGGAGTCCTCTGAGACAGGTGCTTGTGTTGTTTGCCGGGGACGAGAACCTGAGGATCTGCTCATGAGTTGCCATCTTTGCCATATTCGACAAATCCACTCCTATTGCCTGGATCCTCCTTTATTGCCATGGACATGTAATCACTGTAAGGATCTTCGGATGCTTTATTATAATAATTCACATCAGTACATATCTTCCTAA 1473 0.4162 MEDEEEDQLQRQPRGSMAVPIQGMESVVATVSGYHGTERFNLIKLISHAGANYVGAMSRSITHLICWRFEGKKYSLARKFRTVIVNHQWIEDCLKQGRRVPVEPYKLKSGAEVGPISLQVPLIALESNLIENNVLKHGSDDVVSISQTTDISFGASGNLVSEDSYFMNEEELVTFSSRQSRNGKRKISNSNRVTPSAGPSRHRRRLVKRNVQEVSASLLDFNSEEYLNGMDRFNTDVVASSSLSGGVSTDIILEDREGSDIDSYNQNLANNAASNATEQIKDSKYFSSSKITTRCVQDALPTAEQISVDKCFEKSADGIQEGHAADLRTSTELSCVICLTEFSSTRGVLPCGHRFCYSCIQSWVDHRTAMGKVSTCPLCKSRFDSIMKYEDLAVDQKIYSQTIPCGIPISDMILLMDREQPNYGLESSETGACVVCRGREPEDLLMSCHLCHIRQIHSYCLDPPLLPWTCNHCKDLRMLYYNNSHQYISS 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g2959 490 MobiDBLite consensus disorder prediction 176 204 - -
Mibi02g2959 490 Pfam twin BRCT domain 27 89 IPR001357 -
Mibi02g2959 490 SMART BRCT_7 21 97 IPR001357 -
Mibi02g2959 490 SUPERFAMILY BRCT domain 20 108 IPR036420 -
Mibi02g2959 490 MobiDBLite consensus disorder prediction 176 197 - -
Mibi02g2959 490 Gene3D BRCT domain 22 106 IPR036420 -
Mibi02g2959 490 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 420 488 IPR013083 -
Mibi02g2959 490 SUPERFAMILY FYVE/PHD zinc finger 420 475 IPR011011 -
Mibi02g2959 490 PANTHER F5A8.9 PROTEIN 161 483 - -
Mibi02g2959 490 SUPERFAMILY RING/U-box 326 388 - -
Mibi02g2959 490 ProSitePatterns Zinc finger RING-type signature. 351 360 IPR017907 -
Mibi02g2959 490 ProSiteProfiles Zinc finger RING-type profile. 335 380 IPR001841 -
Mibi02g2959 490 ProSiteProfiles BRCT domain profile. 16 107 IPR001357 -
Mibi02g2959 490 SMART ring_2 335 379 IPR001841 -
Mibi02g2959 490 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 312 404 IPR013083 -
Mibi02g2959 490 Pfam Ring finger domain 334 380 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g2959 Mibi-ChrMibi02 52125474 52129910 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g2959 61 113 Core DNA Replication Machinery Family AT4G02110 48.148 8.49e-11 62.8