Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g2955 ATGGCTTCTCCAAATTCTTCCCCTTCTGCTGTTCCACCAACTTCTGCTGATACTTCCCCTTCAAATTCTCTCATATCATCACAACCTCCCACTTCATCACCCCCTAGTCAAACATCTACTACCCTTCCTCCTTCATCATCTTCTGACACTGTAACCCCACCTCCTTCCCCATCTCTTTCTCCTCCACCAGCTACACCACCTCCAATTTCATCCCCACCACCGGCATTGCCTCCACCACCACCGGCTTTGCCCCCACCCGAAGCATTGCCGCCACCGGCTTCGCCACCTCCGGCTTCAACCCCGCCTCCAGCATTGCCACCACCATCTGTACCATCTACACCAAATTCTCCTCCACCAACATCTTCAGCATTGCCACCACCATCACTATCACCTCCACCAGCATCTGTTTCTAGCCCTCCTCCAGATGAGAAATCACCTGCTGCTCAAATTTTATCCCCACCACCTCCAGTTGAAGGTTCTCCTCCTCCTCAGGCCTCAAAAGAATCTCCTCCTGCAGCAGATTCGCCTCCCTCTCGAAGCAATTCACATCCTCCTCCACCTCCTCCAAAGAATGCCCCAAAATCACCATCCTCCAGTTCCCCTCCTCCACCTCTGGTAAAGCCACCAGAAAGTGCTCCTGTGATCACACCCCCACCATCTGTTTCAGAATCCCCTCCTTCTCCTACTGCAGATACTCCCCCTCAATCTGCAACACCATCACCTTCTCCTCCTTCAGTTCCAACTGCCACTTCCTCTCCACCAACTGTTTCACCTTCTCCTCCAACTAATTCATCAGCAGCTGGGGTCCCAGTCGCGGCGCTACCGACTATTCCAACAGAGAAGCCTACCGCGAAACCAACTGATGGTACTAGTGTAACTGCAAATGCCCCACCTACACATTCTAAGGGATTAAATGCCGGAGCAGGTGTGGCTATTGGTGTCATAATTGGTTTTGTTGTCCTCAGCCTTCTTGTTATGGCTGTGTGGTTTGTAAAACGAAAGAGGAAGCAAACAGGATCAAAAGTTGGTTATGCTATGGCCTCTCCATTTGGCTCATCTCAGAATTCAGGTACCATATTCTTGAGGCCACAGTCTCCAGCTCTCTATTTTGGCAGTAACTCTGGTAGTGATCTCATGTATTCTCCATCAGAGCCTGGTGGAAAAAGTCAGTCAAGATCGTCATTCATGTATGAAGAACTTTTGCAAGCAACAGATGGGTTTTCAGCAAGAAACCTTTTGGGTGAAGGTGGATTTGGTTGTGTCTTCAAAGGTTTGCTCACTGATGGAAGGGAAATCGCTGTCAAACAGCTCAAAGTTGGTGGCAGCCAAGGGGAGCGTGAATTTCAAGCAGAAGTGGAGATTATTAGCCGAGTACATCATCGCCATCTGGTTTCCTTGGTGGGTTACTGCATATCAGAGCATCAAAGATTGCTTGTCTATGACTATTTGCCCAACAATACCCTTCATTACCATCTTCATGGTGAAGACAGGCCAGTTTTGGACTGGGCTACCAGAGTCAAGATTGCTGCCGGTTCAGCTCGTGGAATAGCTTACCTACATGAAGACTGCCATCCACGCATTATTCACCGAGACATCAAGTCATCAAACATCCTTCTTGACAACAACTTTGATGCTCGAGTTTCAGATTTTGGGCTTGCAAAATTAGCCTTGGATTCATACACACATGTAACTACTCGCGTAATGGGAACCTTTGGGTACATGGCACCAGAGTATGCAACAAGTGGGAAGTTGACGGAAAAATCTGATGTTTATTCTTTTGGAGTTGTAATGTTGGAGCTAATAACAGGTCGGAAGCCTGTAGATGCCTCTCAGCCAATTGGTGATGAGAGCCTGGTTGAATGGGCTCGGCCTTTGCTAACTGAAGCACTTGATAACGAAGACTTTGAAATATTAGTGGATCCAAAGTTAGAGAAGAACTATAATAGAAATGAAATGTTCCGGATGATCGAGGCAGCTGCAGCCTGTGTGCGTCACTCTGCAGTGAAGAGGCCTCGAATGAGTCAGGTAGTGAGAGCATTAGATTTGATGGATGAACTAGCAGATCTGAATAATGGAATGAAGCCTGGGCAGAGCTCAGTGTTTGATTCTGCAGAGCAAAATGAACAAATCAGAATGTTCAGGAGGCTGGCTTTTGGAAGCCAGGATTACAGTAGCAGTTATTTCAATGAGTCTCATAGTAGCTGGAGAAGTAGAGATCAAGGCCACCACACCACCACTTCCTTCTCCCAAAATAGATCTGGACCATGGAACGTGTAA 2277 0.4769 MASPNSSPSAVPPTSADTSPSNSLISSQPPTSSPPSQTSTTLPPSSSSDTVTPPPSPSLSPPPATPPPISSPPPALPPPPPALPPPEALPPPASPPPASTPPPALPPPSVPSTPNSPPPTSSALPPPSLSPPPASVSSPPPDEKSPAAQILSPPPPVEGSPPPQASKESPPAADSPPSRSNSHPPPPPPKNAPKSPSSSSPPPPLVKPPESAPVITPPPSVSESPPSPTADTPPQSATPSPSPPSVPTATSSPPTVSPSPPTNSSAAGVPVAALPTIPTEKPTAKPTDGTSVTANAPPTHSKGLNAGAGVAIGVIIGFVVLSLLVMAVWFVKRKRKQTGSKVGYAMASPFGSSQNSGTIFLRPQSPALYFGSNSGSDLMYSPSEPGGKSQSRSSFMYEELLQATDGFSARNLLGEGGFGCVFKGLLTDGREIAVKQLKVGGSQGEREFQAEVEIISRVHHRHLVSLVGYCISEHQRLLVYDYLPNNTLHYHLHGEDRPVLDWATRVKIAAGSARGIAYLHEDCHPRIIHRDIKSSNILLDNNFDARVSDFGLAKLALDSYTHVTTRVMGTFGYMAPEYATSGKLTEKSDVYSFGVVMLELITGRKPVDASQPIGDESLVEWARPLLTEALDNEDFEILVDPKLEKNYNRNEMFRMIEAAAACVRHSAVKRPRMSQVVRALDLMDELADLNNGMKPGQSSVFDSAEQNEQIRMFRRLAFGSQDYSSSYFNESHSSWRSRDQGHHTTTSFSQNRSGPWNV 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g2955 758 SUPERFAMILY Protein kinase-like (PK-like) 387 681 IPR011009 -
Mibi02g2955 758 Pfam Protein tyrosine and serine/threonine kinase 410 680 IPR001245 GO:0004672|GO:0006468
Mibi02g2955 758 ProSitePatterns Protein kinases ATP-binding region signature. 413 435 IPR017441 GO:0005524
Mibi02g2955 758 MobiDBLite consensus disorder prediction 1 304 - -
Mibi02g2955 758 MobiDBLite consensus disorder prediction 283 300 - -
Mibi02g2955 758 MobiDBLite consensus disorder prediction 734 758 - -
Mibi02g2955 758 Gene3D Transferase(Phosphotransferase) domain 1 483 699 - -
Mibi02g2955 758 ProSitePatterns Serine/Threonine protein kinases active-site signature. 527 539 IPR008271 GO:0004672|GO:0006468
Mibi02g2955 758 FunFam proline-rich receptor-like protein kinase PERK8 483 695 - -
Mibi02g2955 758 Gene3D Phosphorylase Kinase; domain 1 382 482 - -
Mibi02g2955 758 MobiDBLite consensus disorder prediction 177 260 - -
Mibi02g2955 758 FunFam Proline-rich receptor-like protein kinase PERK8 379 482 - -
Mibi02g2955 758 SMART serkin_6 407 653 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g2955 758 MobiDBLite consensus disorder prediction 48 170 - -
Mibi02g2955 758 ProSiteProfiles Protein kinase domain profile. 407 683 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g2955 758 MobiDBLite consensus disorder prediction 1 47 - -
Mibi02g2955 758 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 319 724 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g2955 Mibi-ChrMibi02 52096214 52102882 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g2955 280 740 Trihelix Transcription Factor Family AT5G38560 68.499 0.0 672
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Mibi02g2955 PK_Tyr_Ser-Thr 2.3e-47 CL0016