Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g2920 ATGGCTCGGTCTGCGAGAGGTCAACAACAAGATTTCGAAGATGAAGACGAAGATCACTTGACTGGAAATGGTTCTTCTTCGCATAAAGTGAAGGTGCATGAAGCCACTAGAGATCAGCGGGTTAACGCGCATCGTTCTAAGCATTCAGAAACTGAGCAGCGGAGAAGGAGCAAAATAAATGAAAGATTTCAGATTCTGAGAGATCTCATCCCTCAAAATGATCAGAAAAGGGATAAGGCTTCTTTCTTGCTGGAGGTTATCGAGTATATTCAATTTTTACAGGAGAGATTACAAATGTATGACCAATCTTACCAAGGGTGGAATCAGGAGCCAATGAAATTAATTCCTTGGAGAAATCATAGTGGACCTTCAGATAATGTCACATCTCAGGCTGTACAAAATGGTTCTGGTCATGAGAACAATGACGTGTCTCTGTCACTGCCCTTAAATGCACAGAATACAATGGAATCTGACTTGTCATCGACAATTATTCACAAGGTTGCCCCCCATGCTTTAGCTTCTGATGCAGTTCCCTTGGGCATGCAAATGCGGTTGGACATGTTTGATCTGACTGTGAGCAGTGGTATTCCAGCCCAACATTTACATGAAGCAGTATCTAACATTGAGAACACGCCTTCCCATACTCAGCCTCAGGTGTCTCTTAGTGAACCTAAGGAGGGTGCATATGATTTTCGAAATGATACATTGAAGGAACAAGACGAGCTGACGTTTGAAAGTGAATCGGTTAGCATCTCAAAAGCCTATTCTCAGGGAATATTAGACACTTTTGTGCAATCATTGCGCTCTTCAGGCGTGGATTTATCTGAGGCCAATGTTTCAGTACAAGTTGATGTAGGGAGACGATCGATTGCCTCCACATCAAGCTCAAAGGATCATGAGAATCAATTTGTGAACAACCCATCAATGCCATGTTCAGGAGTAGACTACTACAGTGAGGATTCTGAACAAGTTCTTAAGAGGCTCAGAACAAAAGAGAGTTAG 1002 0.4251 MARSARGQQQDFEDEDEDHLTGNGSSSHKVKVHEATRDQRVNAHRSKHSETEQRRRSKINERFQILRDLIPQNDQKRDKASFLLEVIEYIQFLQERLQMYDQSYQGWNQEPMKLIPWRNHSGPSDNVTSQAVQNGSGHENNDVSLSLPLNAQNTMESDLSSTIIHKVAPHALASDAVPLGMQMRLDMFDLTVSSGIPAQHLHEAVSNIENTPSHTQPQVSLSEPKEGAYDFRNDTLKEQDELTFESESVSISKAYSQGILDTFVQSLRSSGVDLSEANVSVQVDVGRRSIASTSSSKDHENQFVNNPSMPCSGVDYYSEDSEQVLKRLRTKES 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g2920 333 Coils Coil 90 110 - -
Mibi02g2920 333 Gene3D - 41 114 IPR036638 GO:0046983
Mibi02g2920 333 MobiDBLite consensus disorder prediction 290 316 - -
Mibi02g2920 333 MobiDBLite consensus disorder prediction 121 142 - -
Mibi02g2920 333 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 43 93 IPR011598 GO:0046983
Mibi02g2920 333 Pfam Helix-loop-helix DNA-binding domain 45 94 IPR011598 GO:0046983
Mibi02g2920 333 MobiDBLite consensus disorder prediction 119 142 - -
Mibi02g2920 333 MobiDBLite consensus disorder prediction 1 57 - -
Mibi02g2920 333 PANTHER BES1-INTERACTING MYC-LIKE PROTEIN 4 331 IPR044295 GO:0003700|GO:0006351|GO:0046983
Mibi02g2920 333 SMART finulus 49 99 IPR011598 GO:0046983
Mibi02g2920 333 CDD bHLH_AtBIM_like 42 118 - -
Mibi02g2920 333 FunFam BHLH domain class transcription factor 41 113 - -
Mibi02g2920 333 MobiDBLite consensus disorder prediction 290 312 - -
Mibi02g2920 333 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 44 121 IPR036638 GO:0046983
Mibi02g2920 333 MobiDBLite consensus disorder prediction 8 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g2920 Mibi-ChrMibi02 50686944 50691636 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g2920 3 289 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G69010 37.374 9.57e-54 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi02g2920 HLH 1.5e-15 No_clan