Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g2911 ATGGGTTCTGTTTGTGGCTGTTTGAGCGTTGAGAATCTTGAAGATTATGTAAATCCAAATAGTTCTGTATATAGAAATTGCATGTGCTTCAGTTGCTTCATACATAACTTTGTGAATGTGTATACAACAATATTTCGTAGGCGTGAAGTGCATTCTATTACTTCATCTATCCAGGGGGCAGGATCTATGACTTCTACAGCATCACTAGATAATTCGTTATCAGACATGTACCGTGCTCCTCCACGGCCCTTGCCATATGATGCAGACTTCAGACGTGATGGACTAGTTTCAAGACGTGAAAAGGGTTCAAGTCATTCAAATGAGGAATCACAACCTCTAAGAAGTGATCTAGATATGGATTCAGAGTCTTTGAATTCGGGAGACAAATGGAATGAATGTGTCTTTGAAAATGGATCAAAGGAGTACCTTTCTAAGTCCTCATTAAGAATTTCATCCACTAAATTTACAACTGGGGCCGGGGTGGTCTATGCACCATTAGAAGATGAGGATGTTTGTCCAACATGTCTTGAAGAATATACTCGAGAGAATCCAAAGATAATGACAAAATGCTGTCACCATTTTCATCTTGGTTGCATCTATGAGTGGATGGAAAGAAGTGAAAACTGTCCAGTGTGTGGGAAGGTACCTTTTCTCCTTTTGGTTTGTGAATTTATTCTTGCTGTAATGGCACTGTCTATTTGGCAAGAGGTCTGATGGAATTTGATGAAACGCCATAATCCTTTGCAAGAAGAGGCTTGTGTAGCAGATGAAGCCATCACCAGCTGCAGCAAAAGCAAAAGGAGCTGCAGCAAAAGCAAAAGGAAGAATTAA 831 0.4007 MGSVCGCLSVENLEDYVNPNSSVYRNCMCFSCFIHNFVNVYTTIFRRREVHSITSSIQGAGSMTSTASLDNSLSDMYRAPPRPLPYDADFRRDGLVSRREKGSSHSNEESQPLRSDLDMDSESLNSGDKWNECVFENGSKEYLSKSSLRISSTKFTTGAGVVYAPLEDEDVCPTCLEEYTRENPKIMTKCCHHFHLGCIYEWMERSENCPVCGKVPFLLLVCEFILAVMALSIWQEVXWNLMKRHNPLQEEACVADEAITSCSKSKRSCSKSKRKN 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g2911 276 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 61 215 - -
Mibi02g2911 276 SUPERFAMILY RING/U-box 166 216 - -
Mibi02g2911 276 Pfam Ring finger domain 171 212 IPR001841 -
Mibi02g2911 276 ProSiteProfiles Zinc finger RING-type profile. 172 212 IPR001841 -
Mibi02g2911 276 MobiDBLite consensus disorder prediction 72 91 - -
Mibi02g2911 276 MobiDBLite consensus disorder prediction 97 124 - -
Mibi02g2911 276 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 152 216 IPR013083 -
Mibi02g2911 276 SMART ring_2 172 212 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g2911 Mibi-ChrMibi02 50248394 50253784 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g2911 1 215 C3H Transcription Factor Family AT5G15790 57.080 7.99e-82 244