Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g2910 ATGGCTGCGTCCGTGGTTTCTTTCTTCTTATTTCAGTTTATGATGGCCATCTCTTTCTCTTCTCCAGCATCTCTTGCCTTAGATGGAAGCTGGCAGGATGCTCACGCAACCTTCTATGGCGACATGGCCGGAGGCGAAACTATGCAAGGAGCTTGTGGTTATGGAGACCTATTCAAACAAGGCTATGGCTTAGAAACTGCAGCCCTAAGCACAGCTCTCTTCAACAATGGCCTCACATGTGGCGCATGCTTCGAGCTCGAGTGTGTCAACGAACCGAAATGGCAATGGTGCATCCCTAACGCTGGCAGCATCAAAATCACAGCCACCAACTTTTGTCCACCCAATCACGACCAACCTGATGTCTACCATTGGTGCAATCCTCCCCAAAAACACTTTGATCTCTCCATGGCCATGTTCACCAAATTCGCCTACTACAAAGGCGGTATTGTCCCAGTTCGTTATCGCCGTGTCCCTTGCTTCAAATCTGGTGGTGTCAAGTTCGAGCTCAAGGGTAACCCTTATTGGATAACCGCGCTATTTTATAATGTGGCCAACGCTGGTGACATTACTGATGCTAAGATTAAAGGAGGTAATGGTGGCGATTGGATTCAGATGTCAAGGAATTGGGGCCAGGTCTGGCAGACCGGAACCAACCTAGTAGGACAAAGCTTGTCGTTTAAGGTAACTACTAGTGATGGTAAGACAGTGGAGTTTGAAAATGTTGTGCCTTCAAATTGGCAATTTGGTCAGAGTTATGAGGGAAATCAGAATTTTTAA 777 0.4698 MAASVVSFFLFQFMMAISFSSPASLALDGSWQDAHATFYGDMAGGETMQGACGYGDLFKQGYGLETAALSTALFNNGLTCGACFELECVNEPKWQWCIPNAGSIKITATNFCPPNHDQPDVYHWCNPPQKHFDLSMAMFTKFAYYKGGIVPVRYRRVPCFKSGGVKFELKGNPYWITALFYNVANAGDITDAKIKGGNGGDWIQMSRNWGQVWQTGTNLVGQSLSFKVTTSDGKTVEFENVVPSNWQFGQSYEGNQNF 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g2910 258 PRINTS Expansin signature 104 114 IPR002963 GO:0009664
Mibi02g2910 258 PRINTS Expansin signature 175 196 IPR002963 GO:0009664
Mibi02g2910 258 PRINTS Expansin signature 240 256 IPR002963 GO:0009664
Mibi02g2910 258 PRINTS Expansin signature 139 152 IPR002963 GO:0009664
Mibi02g2910 258 PRINTS Expansin signature 90 101 IPR002963 GO:0009664
Mibi02g2910 258 PRINTS Expansin signature 122 139 IPR002963 GO:0009664
Mibi02g2910 258 PRINTS Expansin signature 163 175 IPR002963 GO:0009664
Mibi02g2910 258 PRINTS Expansin signature 61 75 IPR002963 GO:0009664
Mibi02g2910 258 PRINTS Expansin signature 211 232 IPR002963 GO:0009664
Mibi02g2910 258 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 174 254 IPR007117 -
Mibi02g2910 258 SUPERFAMILY Barwin-like endoglucanases 30 182 IPR036908 -
Mibi02g2910 258 Pfam Expansin C-terminal domain 165 243 IPR007117 -
Mibi02g2910 258 Gene3D - 164 258 IPR036749 -
Mibi02g2910 258 PRINTS Expansin/Lol pI family signature 70 88 IPR007118 GO:0005576
Mibi02g2910 258 PRINTS Expansin/Lol pI family signature 202 216 IPR007118 GO:0005576
Mibi02g2910 258 PRINTS Expansin/Lol pI family signature 240 254 IPR007118 GO:0005576
Mibi02g2910 258 PRINTS Expansin/Lol pI family signature 30 45 IPR007118 GO:0005576
Mibi02g2910 258 PRINTS Expansin/Lol pI family signature 147 163 IPR007118 GO:0005576
Mibi02g2910 258 PRINTS Expansin/Lol pI family signature 48 66 IPR007118 GO:0005576
Mibi02g2910 258 PANTHER EXPANSIN-A15 13 256 IPR002963 GO:0009664
Mibi02g2910 258 SUPERFAMILY PHL pollen allergen 161 254 IPR036749 -
Mibi02g2910 258 SMART dpbb_1 66 154 IPR007112 -
Mibi02g2910 258 Pfam Lytic transglycolase 66 154 IPR009009 -
Mibi02g2910 258 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 49 164 IPR007112 -
Mibi02g2910 258 Gene3D - 16 159 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g2910 Mibi-ChrMibi02 50241436 50242436 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g2910 26 258 Expansin Gene Family AT5G39280 65.236 1.03e-110 318