Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g2906 ATGGTGTCTAGCAAAACAAGCCATGTTTCTTCAATTCAGGTGATCGTTGTGGCTATTATCCTCGCCGCCACAACGGTGTTATCCGACGACAACGTGCAGATTCCGGCAGACAAAAATCAATTGAACAAATGGTTCTCACAAAATGTGAAGCCATTGTCAAGTCGAAAGGGAACTCTAGACACAGCTTTGGTGGCTGCTGAGGCTTCTCCGAAGGTTGTTACGGTCTCGGCTAATGGAAAAGCCGACTTCAAGACGATAACGGACGCAATCAAGAGCGTGCCGATGAACAACAAGAGAAGGGTGATAATCAAAATTGGAGGTGGAACTTATAGGGAGAAAGTGACCATTGATAGGACTAAGGATTTCATTACACTCATTGGTGATCCTAAGAACATGCCCAAATTGGTTTATAATGGTGACGCTAAAAAATATGGAACTGTTGATAGTGCTACGTTCATTACCTACAGCAATTACTTCGTCGCTGCAAATATCGTTTTCCAGAATTCATCGCCGATGCCGGACGGGCGAAGGGAGGGAGCTCAGGCGGTGGCGGTTAGAGTCTCCGGCGACAAGTCAGCATTCTACAATTGTGTAATGTTAGGGTTTCAAGACACACTATGTGATGACAAGGGGAACCATTTGTTCAAGGATTGCACAATCCAAGGCACGGTGGACTTCATATTTGGTAGTGGCAAGTCCTTGTACCTTAACACAAAGCTAGTGGTGGTAGGGAAAGTTGGAGGCGTGATTGTGGCTCAGGCGAGAGAGAGCAACGACGATGCCATTGGGTACTCCTTCGTGCATTGTGACATAAGTGGAACTGCCAAGGGCACCTTCTTGGGAAGAGCTTGGATGTCTCATGGTAGAGCTGTGTTTTCTTACACTTCCATGAGTGACATTATTACTCCCCATGGTTGGAACATCAACAACCATCCTTCAATGGCTCAGACTGTATATTTTGGAGAGTACAAGAATAGTGGAAATGGTGCAAACGCTAAAGGACGAGCTCCGTTCACAAAGTTACTAAGTGGCAATGATGCTAAGGAATACCTCAATCTTGGCTTCATTCAAGCTTCTAAGTGGCTGCTTCCTCCTCCTCAAGTCTAA 1107 0.4571 MVSSKTSHVSSIQVIVVAIILAATTVLSDDNVQIPADKNQLNKWFSQNVKPLSSRKGTLDTALVAAEASPKVVTVSANGKADFKTITDAIKSVPMNNKRRVIIKIGGGTYREKVTIDRTKDFITLIGDPKNMPKLVYNGDAKKYGTVDSATFITYSNYFVAANIVFQNSSPMPDGRREGAQAVAVRVSGDKSAFYNCVMLGFQDTLCDDKGNHLFKDCTIQGTVDFIFGSGKSLYLNTKLVVVGKVGGVIVAQARESNDDAIGYSFVHCDISGTAKGTFLGRAWMSHGRAVFSYTSMSDIITPHGWNINNHPSMAQTVYFGEYKNSGNGANAKGRAPFTKLLSGNDAKEYLNLGFIQASKWLLPPPQV 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g2906 368 FunFam Pectinesterase 68 364 - -
Mibi02g2906 368 ProSitePatterns Pectinesterase signature 2. 220 229 IPR033131 -
Mibi02g2906 368 Gene3D - 71 365 IPR012334 -
Mibi02g2906 368 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 64 362 - -
Mibi02g2906 368 Pfam Pectinesterase 73 357 IPR000070 GO:0030599|GO:0042545
Mibi02g2906 368 SUPERFAMILY Pectin lyase-like 67 362 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g2906 Mibi-ChrMibi02 50190261 50192468 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g2906 19 368 Carbohydrate Esterase AT1G69940 54.286 7.56e-144 410