Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g2899 ATGGAGCAAGAACACGAAGAACATGAAGTGTACGGAGGCGATATTCCCGACGATGCCGAGATGGACGCAGATTTCAGGGTTGAAGATGAAGAAGACCAAGAAGGACACCCACATGACCCCAATCACTCTAATAAGGACTTGGAGGACATGAAGAAGAGGCTCAAGGAAATCGAGGAAGAAGCTAGTGCCCTTCGTGAAATGCAGGCTAAGGTTGAGAAAGAGATGGGTGCTGTTCAAGATTCAAGTGGTTCTTCTGCAAGTCAAGCTGAGAAGGAGGAAGTGGATGCGCGGTCGATCTATGTTGGTAATGTTGACTATGGATGTACACCTGAAGAAGTCCAGCAACATTTTCAGTCCTGTGGAACGGTGAACAGAGTGACGATATTGACAGACAAATTTGGTCAACCAAAAGGATTTGCTTATGTTGAGTTTGTTGAGGTTGATGCCGTTCAGAATGCTCTCTTATTGAATGAATCAGAGTTGCATGGTCGTCAATTGAAGGTCTCTGCTAAGCGTACAAATGTCCCTGGAATGAAACAGTATCGTGGAAGAAGACCTATGGGTTTTCGACCTAGAATGCCTTACATGCCTTCTCCATTTTATCCTCCTTATGGTGGTTATGGGAGGTTTCCGAGGTATAGGCGTCCTACACGTTACAGGCCATACTAG 669 0.4559 MEQEHEEHEVYGGDIPDDAEMDADFRVEDEEDQEGHPHDPNHSNKDLEDMKKRLKEIEEEASALREMQAKVEKEMGAVQDSSGSSASQAEKEEVDARSIYVGNVDYGCTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPMGFRPRMPYMPSPFYPPYGGYGRFPRYRRPTRYRPY 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g2899 222 MobiDBLite consensus disorder prediction 1 94 - -
Mibi02g2899 222 Gene3D - 16 180 IPR012677 -
Mibi02g2899 222 SUPERFAMILY RNA-binding domain, RBD 88 199 IPR035979 GO:0003676
Mibi02g2899 222 Coils Coil 44 74 - -
Mibi02g2899 222 SMART rrm1_1 98 169 IPR000504 GO:0003723
Mibi02g2899 222 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 99 167 IPR000504 GO:0003723
Mibi02g2899 222 CDD RRM_II_PABPs 98 169 - -
Mibi02g2899 222 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 97 173 IPR000504 GO:0003723
Mibi02g2899 222 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H 18 207 - -
Mibi02g2899 222 MobiDBLite consensus disorder prediction 30 73 - -
Mibi02g2899 222 MobiDBLite consensus disorder prediction 1 15 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g2899 Mibi-ChrMibi02 50049612 50060365 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g2899 98 169 Eukaryotic Initiation Factors Gene Family AT2G36660 35.526 3.58e-09 54.3