Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g2883 ATGCCGGAGATGGCTTCTGCTAATTCCAACTACCCCAATAACAATCAGTTTGGTGACACCACTCTCACCAAAGTGTTTGTTGGTGGATTGGCTTGGGAGACTCCCAAGGACGCCATGAGAGAGCATTTTCAGAAATACGGTGAGATCCTCGAGGCCGTCATTATCTCCGATAAGGTCACCGGTAGATCCAAGGGCTATGGCTTCGTGACATTTAAGGAAGCTGAAGCTGCGAAGAAGGCTTGTGAGGATGCAACGCCGATTATCAATGGACGGCGAGCCAATTGCAATCTGGCTTCGCTTGGAGCGCGACGGCCTAGGTCCACCAACAATTCACCGCCTCGTCAACAAGGATCTAACGGCGGAGGACCAAGGAACGCACAAAACGCACCACCCCCGCCAGCCAATCATGCCCCATGGTATTATCCTGTGGGGACCCCTGCTTCACATTTCCATCATCACCACCACCATCAACCTGTTCCTCTATATGGGTACACCCCAACGTACATTCCAACTGACATAAATTACAATCAGAAGCTAAGCTACACTGGCAGTGGGCCGTACATGAATGGATACTACTCTCCAATGTATCCGAGCCAGGCTATGGTGGGTGGGAACACATTGATGCCGATGTACCCGCTTTATCAATACCATCAAACCCACACGATGGGCCTACCTGCACACATATTCCAGCCAACCACAGCGAGCCACGTGGCGATCATGTCGAAGCCAGCCTCCAGGACTCCAAACACAGGTGTGGTTGGGAGAGGTGAAGGCTTGAAAAAGGTTGGCTGA 792 0.5177 MPEMASANSNYPNNNQFGDTTLTKVFVGGLAWETPKDAMREHFQKYGEILEAVIISDKVTGRSKGYGFVTFKEAEAAKKACEDATPIINGRRANCNLASLGARRPRSTNNSPPRQQGSNGGGPRNAQNAPPPPANHAPWYYPVGTPASHFHHHHHHQPVPLYGYTPTYIPTDINYNQKLSYTGSGPYMNGYYSPMYPSQAMVGGNTLMPMYPLYQYHQTHTMGLPAHIFQPTTASHVAIMSKPASRTPNTGVVGRGEGLKKVG 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g2883 263 MobiDBLite consensus disorder prediction 101 125 - -
Mibi02g2883 263 MobiDBLite consensus disorder prediction 100 138 - -
Mibi02g2883 263 FunFam Putative RNA-binding protein ARP1 17 106 - -
Mibi02g2883 263 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 25 82 IPR000504 GO:0003723
Mibi02g2883 263 PANTHER BOULE-RELATED 5 229 IPR037366 -
Mibi02g2883 263 SUPERFAMILY RNA-binding domain, RBD 18 125 IPR035979 GO:0003676
Mibi02g2883 263 CDD RRM_RBM24_RBM38_like 23 98 - -
Mibi02g2883 263 Gene3D - 13 130 IPR012677 -
Mibi02g2883 263 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 23 100 IPR000504 GO:0003723
Mibi02g2883 263 SMART rrm1_1 24 96 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g2883 Mibi-ChrMibi02 49537502 49541386 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g2883 19 99 C2H2 Transcription Factor Family AT2G19380 40.741 1.34e-14 71.2