Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g2878 ATGTTGGATCTCAATGTCGACATGGAAAGTTCTCAGCTTCAAAAGGAAGAAGACTCTGGCACTTCCAACTCCTCTGTGGTGAATTTCGAAGAATCTCGAGATGAAGATTCTTCCGCCTTCGTTTTCGACATAATGAAGAAAGAAACAAACTTTAAGGAGACGCAGGAAATCACGACGAAGCCACTTTTTCCGGTGAATAGTGACGAAGAGAAGGGACCCAGAAGAGATTGTGATTTCAGATTGGGATTTTCATGTTCGAGAAGTAATCAATGGCTGAACTTGTCTTTCTCTGAGAGTGGTGTTGTTGGTGGTGGTGGTGGTGGTGGCGGCACGCAAGGTGAATTAAGAGTTTTGCAGCAAAAGCAACCCCAAATCAGGAAAAGCAGAAGAGGGCCCAGGTCTCGCAGCTCACAGTACAGAGGTGTTACTTTCTATCGCAGGACTGGTCGATGGGAATCCCATATATGGGATTGTGGGAAGCAGGTCTATTTAGGTGGATTTGACACTGCGCAAACTGCAGCAAGAGCATATGATAGGGCTGCAATTAAGTTCAGAGGAGTCGATGCTGATATAAATTTCACTCTGAGTGATTATGAGGAAGATATGAAGATGATGAAAGGTTTGAGTAAAGAGGAGTTTGTGCAAGTCCTTCGCCGCCAATGCTCTGGTATCCCAAGAGGGAGCTCAAAATATAGAGGTCTGTCTCTCAACAAATGGGGTCAATGGGAAGCACAAACCAGCCCTTTCCTTGGCAAAAAGCTTTATGACAAGTTACCCATCAAGAGTGATGGAAAAGGATTGGTGAGTAGCTTTGAGCCTAACAAGGGAGAGAGAACTATTGAGTCAAGCAGAGGAGGGAATTATCAAAACCTTGATCTTAGCCTTGGAATTTCTCCCCCTTGTAATGAATCCAAGAAGAACGATGCTGCGAGAGGCTTTTCTTTTCGTTACACCGCTTTGGAGACACCCAACAAAGGAGCGCCAATGGCTGACAGCTCTGGAGCTGCATTAATAAGGGGACAAGCCATTTATGGTGTGGCAATGCCATCTAAATATGACCAAATATGCTCTGGCTTATATCCTGGTTATGTACAGGATTATGAGGAGAAGGCCATAGAGAAGAGAACTGAAGTTGTTCCTTCATCAAGGTTCCCAAATTTGGCTTGGCAACTTCACAGCAACGGCAGCATCGCGTCGGTGCCGGTGTTTACAAATGCAGCATCATCAAAATTCATTTCTTCTGGCAACAACAATGGTGGATCAACCCCACATCCAATCAACAACCCTCATAATAACAATTCTATCTTCAATTTGTGCTTCAGTTCAACCCCAACATCCACACTTAATAACTCCCCAAGTTGCCAAAGTCTTAGCAGCTGA 1380 0.4457 MLDLNVDMESSQLQKEEDSGTSNSSVVNFEESRDEDSSAFVFDIMKKETNFKETQEITTKPLFPVNSDEEKGPRRDCDFRLGFSCSRSNQWLNLSFSESGVVGGGGGGGGTQGELRVLQQKQPQIRKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAQTAARAYDRAAIKFRGVDADINFTLSDYEEDMKMMKGLSKEEFVQVLRRQCSGIPRGSSKYRGLSLNKWGQWEAQTSPFLGKKLYDKLPIKSDGKGLVSSFEPNKGERTIESSRGGNYQNLDLSLGISPPCNESKKNDAARGFSFRYTALETPNKGAPMADSSGAALIRGQAIYGVAMPSKYDQICSGLYPGYVQDYEEKAIEKRTEVVPSSRFPNLAWQLHSNGSIASVPVFTNAASSKFISSGNNNGGSTPHPINNPHNNNSIFNLCFSSTPTSTLNNSPSCQSLSS 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g2878 459 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 100 306 - -
Mibi02g2878 459 SMART rav1_2 138 200 IPR001471 GO:0003700|GO:0006355
Mibi02g2878 459 CDD AP2 138 196 IPR001471 GO:0003700|GO:0006355
Mibi02g2878 459 SUPERFAMILY DNA-binding domain 137 195 IPR016177 GO:0003677
Mibi02g2878 459 Pfam AP2 domain 138 186 IPR001471 GO:0003700|GO:0006355
Mibi02g2878 459 Gene3D AP2/ERF domain 137 195 IPR036955 GO:0003700|GO:0006355
Mibi02g2878 459 MobiDBLite consensus disorder prediction 120 139 - -
Mibi02g2878 459 MobiDBLite consensus disorder prediction 1 37 - -
Mibi02g2878 459 FunFam AP2-like ethylene-responsive transcription factor 137 196 - -
Mibi02g2878 459 ProSiteProfiles AP2/ERF domain profile. 138 194 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g2878 Mibi-ChrMibi02 49403047 49406629 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g2878 1 425 AP2-EREBP Transcription Factor Family AT5G60120 40.171 1.95e-68 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi02g2878 AP2 3e-10 CL0081