Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g2849 ATGGAGGAGGCGATATTGCCTTGCCTTTCATCGGATATTACAAGATACCATGTTTCGCCGGTAATGGTTAGCACCAATAAGCCTATCAAAGAAGAAGAAGAGGAAGTGCAAAGACAGAAAGCCCCACAACAGATTGCCCCATCTATTATCAAACCTACAATCTCTGAGTTCAGTGGCGTGCACACTGATGAAACGCTGGCTCACGTAATCTCTCGCTATGTGGACACTCTAACTCACCTTAAAGATCGTTACTTGGGGTATCCGACTAATCAAGACTTGAACTACGAGGCACTCATGCAACTGATGTGTTTTCGATTAAACAATGCTGGCGATCCTTTTACAGGGAGTAGTTACATGCTTAATTCGTATGAGTTTGAGCTGTGTGTACTAGATTGGTTTGCCAAACTTTGGGAAATTGAGAAGAATAAGTACTGGGGATATGTTACAAATGGTGGAACTGAAGGAAATCTATATGCCATCCTAGTGGGGCGGGAGCTATATCCAGATGGAATTTTGTACACATCAAAAGAATCTCATTATTCATTGTTCAAGATAGCAAGAGTAGCTAAAGTCAAGTGTGTGGTAATTGAGGCAAAACCCTCAGGTGAGATTGACTATGATGAACTAAAGGTTTCACTTCTTACTAACAAAGACAAGCCAGCCATCATCAACCTAAACCTTGGTACAACTGTAAAAGGAAAAGGAGGTATTGATGACCTTGATCTAGTACTGAAAATACTTGACGATTGTGGTTACACAGAAGATCGATTCTACATTCATTGTGATGCCGCTTTATTTGGAATGATGCTCCCATTTATTAACGGAGCACCAAAGATTTCTTTCAAGAAACCTATTGGAAGTGTATCTGTATCAGGCCATAAATTTCTGGGATGCCCAATCCCATGTGGTGTTCTAATAACTCGTTTAAATTATGTCAACATTCTCTCTAAAGAAGTAGAATACCTCGCTTCGAGAGACACCACCATCTCAGGAAGCCGAGTAGGCCATACTTCAATATTCCTTTGGTATGCTCTCAACAAGAGAGGCTTCAATGGCCTTCAAAAAGATGTGAATGAGTGCATCAACAAAGCAATCTATCTTCATGAACGCTTGAGGGAACATGGAATTGGAGTTATGCGCAATAAGTTTAGCAATATTGTGGTGTATGAGAGGCCTCTCGATGATGCATTTACTTGTAGGTGGATACTGGCCAGCAAAGGGAATATATCGCACATTGTGGTCCTACAGCACGTGACCATTGAAAAGATAGATATGTTTGTGAGAGAGTTTGTGAAGAATCGAGCCATTTGGTCCCAAAATAATGATGGAGGCTTAATAGCTCCCTGTATTGCTGAGGAAATTGGTGCCAAGAACTGTGGTTGTTCTTTCCACACGAAGCTGATAAACTCCTGA 1413 0.4119 MEEAILPCLSSDITRYHVSPVMVSTNKPIKEEEEEVQRQKAPQQIAPSIIKPTISEFSGVHTDETLAHVISRYVDTLTHLKDRYLGYPTNQDLNYEALMQLMCFRLNNAGDPFTGSSYMLNSYEFELCVLDWFAKLWEIEKNKYWGYVTNGGTEGNLYAILVGRELYPDGILYTSKESHYSLFKIARVAKVKCVVIEAKPSGEIDYDELKVSLLTNKDKPAIINLNLGTTVKGKGGIDDLDLVLKILDDCGYTEDRFYIHCDAALFGMMLPFINGAPKISFKKPIGSVSVSGHKFLGCPIPCGVLITRLNYVNILSKEVEYLASRDTTISGSRVGHTSIFLWYALNKRGFNGLQKDVNECINKAIYLHERLREHGIGVMRNKFSNIVVYERPLDDAFTCRWILASKGNISHIVVLQHVTIEKIDMFVREFVKNRAIWSQNNDGGLIAPCIAEEIGAKNCGCSFHTKLINS 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g2849 470 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 287 308 IPR021115 GO:0016831
Mibi02g2849 470 Gene3D Aspartate Aminotransferase, domain 1 338 434 IPR015422 GO:0003824
Mibi02g2849 470 Pfam Pyridoxal-dependent decarboxylase conserved domain 124 374 IPR002129 GO:0016830|GO:0019752|GO:0030170
Mibi02g2849 470 PANTHER - 26 465 - -
Mibi02g2849 470 SUPERFAMILY PLP-dependent transferases 29 432 IPR015424 -
Mibi02g2849 470 Gene3D - 118 336 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g2849 Mibi-ChrMibi02 48599751 48603377 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g2849 227 387 Calmodulin-binding Proteins AT1G65960 27.647 5.55e-06 46.6