Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g2847 ATGGTTAGCGCAAAGGAGCCTACTGATGATGAAGAAGAAGTGCAAAGACAGAAAATTCCACAGGAGAATGCCCCATCAATGATCAAACCTACAATCTCGGAGTTCAGTGGGGTGCACACTAATGAAACATTGGCTCATGTAATTGCTCGCTATAGGGACACTCTAACTCACCTTAGAGAGCGTTGCTTGGGTTATCCCGCTAATCAAGACTTGAACTACGAGGCGTTGATGCAACTGATGTGTTTTCGGTTAAATAATGCTGGCGATCCATTTATAGGGAGTAGCTACATGCTTAATTCGTATGAGTTTGAGCTGTGTGTATTAGATTGGTTTGCCAAACTTTGGGAAATCGAGAAGAATGAGTACTGGGGATATGTTACAAATGGTGGAACCGAAGGAAACCTTTATGCCATTTTACTGGGAAGGGAGCTATATCCAGATGGAATTTTGTACACATCAAAAGAATCTCATTATTCATTGTTCAAGATAGCAAGGATAGCTAGAGTGAAGTGTGTGGTAATAGGGGCTAAACCATCTGGTGAGATGGACTATGATGAATTAAAGGCTTCACTTCTTGCTCACAAAGACAAGCCAGCCATCATCAACGTAACCATGGGTACAACTGTGAAAGGAGCTATTGATGACCTTGATCGAGTGCTACAAATACTTGAGGACTGTGGCTTCACACAAGATCGATTCTACGTTCATGTTGATGCCGCTTTATTTGGAATGATTCTCCCATTTATTAACGGAGCACCAAATATTTCTTTTAAGAAGCCTATTGGAAGTGTAACTGTGTCAGGGCATAAATTTCTGGGATGTCCAATGGCATGTGGTGTTCTAATAACTCGTTTGAAATATGCTCAATTTCTCTCTAATAAAGAAGTAGAATACATTGGTTCGAGGGACACTACCATCTCAGGAAGTCGAGGAGGCCATACTTCAATCTTTCTTTGGTATGCTCTCAACAACAGAGGCATCAACGGCCTTAAACAAGATGTGAATGAGTGCATAAAAAACGCAATCTATCTTCATAATAGCTTGAGGAACCATGGAATTGGAGTTATGCGCAACGAGTTTAGCAATATTGTGGTGTTCGAGAGGCCTCTTGATAACGCATTTGCTCGTAGGTGGATGTTGGCTAACGAAGGGAATATATCCCACGTGGTGGTGCTACAGCACGTGACCATGGAAGTGATAGATTTGTTTGTGGGAGATTTTGTGAAGAATCGATCCATTTGCTCCCAAGATAAAAATGGAGGCATAATAGCTCGCTGTATTGCTGAGGAAATTGGTGCCGAGAACTGTGCTTGTTATTTGCACACGAAGCACACCAACTCCTGA 1344 0.4196 MVSAKEPTDDEEEVQRQKIPQENAPSMIKPTISEFSGVHTNETLAHVIARYRDTLTHLRERCLGYPANQDLNYEALMQLMCFRLNNAGDPFIGSSYMLNSYEFELCVLDWFAKLWEIEKNEYWGYVTNGGTEGNLYAILLGRELYPDGILYTSKESHYSLFKIARIARVKCVVIGAKPSGEMDYDELKASLLAHKDKPAIINVTMGTTVKGAIDDLDRVLQILEDCGFTQDRFYVHVDAALFGMILPFINGAPNISFKKPIGSVTVSGHKFLGCPMACGVLITRLKYAQFLSNKEVEYIGSRDTTISGSRGGHTSIFLWYALNNRGINGLKQDVNECIKNAIYLHNSLRNHGIGVMRNEFSNIVVFERPLDNAFARRWMLANEGNISHVVVLQHVTMEVIDLFVGDFVKNRSICSQDKNGGIIARCIAEEIGAENCACYLHTKHTNS 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g2847 447 Gene3D Aspartate Aminotransferase, domain 1 322 411 IPR015422 GO:0003824
Mibi02g2847 447 PANTHER - 21 442 - -
Mibi02g2847 447 Pfam Pyridoxal-dependent decarboxylase conserved domain 101 352 IPR002129 GO:0016830|GO:0019752|GO:0030170
Mibi02g2847 447 Gene3D - 80 321 IPR015421 GO:0003824
Mibi02g2847 447 SUPERFAMILY PLP-dependent transferases 38 409 IPR015424 -
Mibi02g2847 447 MobiDBLite consensus disorder prediction 1 23 - -
Mibi02g2847 447 MobiDBLite consensus disorder prediction 1 18 - -
Mibi02g2847 447 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 263 284 IPR021115 GO:0016831
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g2847 Mibi-ChrMibi02 48470960 48474475 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g2847 201 364 Calmodulin-binding Proteins AT1G65960 28.736 9.00e-10 58.2