Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g2806 ATGGGAAATATTGTTCTTTCTAGTGTTACCCCATCTGTGTTATTTTCTCTGTTCTTCTTCTGTCTTGTCATGGCAAAGATTGAACATGTTTCTTCTCTCTCACCTGATGAACAAGCCCTTCTTTCCCTTATATCTTCAGCTGATCCTTCAGCAAAATCCTCCTCTTCTGTTCTCTCTTCATGGAACCCATCAAGCCAAACCCCTTGTTCATGGCATGGTGTCACTTGCTCCCCACAAGGTAGAGTCATTTCATTATCTATTCCAGACACTTTCCTTAACCTTTCTTCTCTGCCTTCCCAGCTTTCTTCTTTGTCATATCTGCAACTTCTCAATCTGTCTTCCACTAATATATCTGGCTCTATCCCACCTTCTTTTGGCCAACTCTCACATCTTCGCCTCCTTGACATGTCTTCAAATTCTCTCACTGGTTCCATTCCTGAAGAACTAGGCAAACTCTCTTCGCTGCAGTTCCTTTTCTTAAACTCCAATGGATTGACTGGAAGAATTCCTCAGCAGTTTGCTAATCTTACTTCACTTCAAGTTTTCTGCCTTCAAGACAATCTCCTTAATGGGTCAATACCATCACAATTAGGCTCTTTGACATCCCTACAAGAGTTTCGGATTGGGGGTAATCCGTATCTAAGTGGTGCAATTCCTCCGCAATTAGGACTACTCACCAATCTTACTACATTTGGGGCTGCTGCCACTGGACTTTCAGGTGTTATTCCATCTACATTTGGGAACTTGATCAATCTTCAAACTCTAGCACTTTATGATACAGAAATTTCTGGTCCTATACCACATGAGCTTGGCTTGTGTTCTGAGCTGAGGAATCTGTACTTGCACATGAATAAGCTGACAGGTTCTATCCCACCTGAACTTGGTAAGTTGCAAAAGCTTACTAGCCTGCTTCTTTGGGGAAATGCCTTATCTGGGTCAATCCCTGCTGATATTTCCAATTGTTCATCTCTTGTTGTGTTTGATGCCTCTGCTAATGAACTTGTGGGTGAAATACCATACGATTTTGGAAAGCTGGTGGTTCTAGAGCAGCTTCATCTATCAGACAATTCCCTCTCAGGGAAGATACCTTGGCAACTGAGCAACTGCACCAATCTTGCTACCCTTCAGCTTGACAAGAATCAGTTATCAGGTACTATTCCATGGCAGGTTGGGAGATTGAAGTATTTGCAGTATTTTTTCTTGTGGGGTAATTCAGTGTCTGGAACCATACCTGCCTCTTTTGGTAACTGTACAGAACTTTATGCACTTGACCTTTCAAGGAACAAGCTGACAGGTTCAATCCCAGATGAAGTTTTCAGCTTGAAGAAGCTGAGTAAGCTTTTGCTTTTGGGTAATTCCTTATCTGGAGAGCTATCACCAAGCGTTTCAAACTGTGAGTCTCTAGTAAGGTTGAGGCTTGGAGAAAATCAGCTTTCAGGACGTATTCCCAGAGAGATTGGCCAACTGCAGAATCTGGTATTCCTTGACTTGTACATGAACCATTTCTCGGGAAGCTTGCCGGTGGAGATTGGAAACATCACAGTTCTTGAGCTTCTAGACGTTCATAATAATCAGATTACTGGGGATATCCCATCTCAGCTTGGGGAGCTTGTAAATTTAGAGCAGCTAGATCTCAGTAGAAACAGTTTGACAGGTGGAATTCCTTGGAGCTTTGGGAACTTAAGTTATTTGAACAAGCTCATTCTCAACAATAATCTACTCACAGGGTCAATGCCAAAATCCATTAGAAATTTGCAGAAGCTAACTCTATTGGATTTAAGTTACAATAACTTCTCTGGAGACATTCCATCTGAGATTGGTTATATTACAAGTTTAACCATCAGTTTGGACTTGAGCTCAAATGCATTTACAGGAGAAATCCCAGAGTCAATGAGCAGTTTGACTCAGTTACAATCCCTTGATCTTTCTCATAATTTGCTTTATGGAGAAATTAAAGTTCTTGGTTCCCTCACCAGTCTCACTTCCCTAAATATCTCTTTTAACAACTTCTCAGGTCCTATCCCAGTAACTCCTTTCTTTAGAACTCTATCTTCAAATTCATATTTTAAGAATCCCCATCTTTGTGAATCCCTTGATGGGACCACATGTTCTAGTCTGCTTCGAAGAAGTGGCCTAAAATCTGCCAAAACCATAGCTTTGATATCGGTAATTCTTGCCTCACTTACCATGGTTTTCATTGCATCTTGGATTTTGGTGACCCGAAATCACAAGAATATGATTGAAAAATCTTTGGGGGCATCAGCATCTGCTTCAGGAGCTGAGGATTTCTCATATCCTTGGACTTTCATCCCATTTCAAAAACTCAACTTCACCATAGATAATATCTTGGATTGCTTGAAGGATGAGAATGTGATCGGAAAGGGTTGCTCTGGCATTGTTTACAAGGCTGAAATGCCTAATGGGGAGTTGATAGCTGTAAAGAAGCTTTGGAAGGCAAACAAAGAGGAAGAAACTGTGGACTCTTTTGCTGCAGAAATTCAGATTCTTGGGCACATCCGACATAGAAACATTGTGAAGCTCCTAGGTTATTGTTCTAACAGAAGTGTTAAGCTTCTTCTCTACAATTACATTCCAAATGGTAACTTAAGACAGCTGTTGCAAGGGAATAGGTACCTAGACTGGGAAACTAGGTACAAGATTGCTGTTGGGTCGGCTCAGGGTTTAGCATACCTTCATCATGACTGTGTGCCAGCAATCCTCCACAGAGATGTTAAGTGCAATAACATACTTCTAGATTCCAAGTTTGAGGCGTATCTAGCAGATTTTGGTCTTGCCAAGTTGATGAGCTCACCAAATTATTACCATGCAATGTCCAGAGTCGCTGGATCTTATGGTTATATTGCCCCAGAGTATGGCTACACCATGAACATAACAGAGAAGAGTGATGTCTACAGTTATGGAGTGGTTTTGCTTGAAATACTGAGTGGAAGAAGTGCTGTTGAGTCCCATGTTGGGGATGGAGTACACATAGTTGAGTGGGTGAAGAGGAAGATGGGAAGCTTTGAACCAGCAGTGTCAATCCTGGACACAAAGCTTCAAGGCCTACCAGATCAAATGGTTCAAGAGATGCTTCAAACTCTTGGGATTGCCATGTTCTGTGTGAACTCTTCGCCAGCTGAACGACCAACAATGAAGGAAGTGGTGGCTCTACTAATGGAGGTGAAGAGCCCACCTGAGGAAGTGGGAAAGACCTCTCAGCCTCTAATAAAGCAGTCCTCAAATCAAAGTTAA 3252 0.4188 MGNIVLSSVTPSVLFSLFFFCLVMAKIEHVSSLSPDEQALLSLISSADPSAKSSSSVLSSWNPSSQTPCSWHGVTCSPQGRVISLSIPDTFLNLSSLPSQLSSLSYLQLLNLSSTNISGSIPPSFGQLSHLRLLDMSSNSLTGSIPEELGKLSSLQFLFLNSNGLTGRIPQQFANLTSLQVFCLQDNLLNGSIPSQLGSLTSLQEFRIGGNPYLSGAIPPQLGLLTNLTTFGAAATGLSGVIPSTFGNLINLQTLALYDTEISGPIPHELGLCSELRNLYLHMNKLTGSIPPELGKLQKLTSLLLWGNALSGSIPADISNCSSLVVFDASANELVGEIPYDFGKLVVLEQLHLSDNSLSGKIPWQLSNCTNLATLQLDKNQLSGTIPWQVGRLKYLQYFFLWGNSVSGTIPASFGNCTELYALDLSRNKLTGSIPDEVFSLKKLSKLLLLGNSLSGELSPSVSNCESLVRLRLGENQLSGRIPREIGQLQNLVFLDLYMNHFSGSLPVEIGNITVLELLDVHNNQITGDIPSQLGELVNLEQLDLSRNSLTGGIPWSFGNLSYLNKLILNNNLLTGSMPKSIRNLQKLTLLDLSYNNFSGDIPSEIGYITSLTISLDLSSNAFTGEIPESMSSLTQLQSLDLSHNLLYGEIKVLGSLTSLTSLNISFNNFSGPIPVTPFFRTLSSNSYFKNPHLCESLDGTTCSSLLRRSGLKSAKTIALISVILASLTMVFIASWILVTRNHKNMIEKSLGASASASGAEDFSYPWTFIPFQKLNFTIDNILDCLKDENVIGKGCSGIVYKAEMPNGELIAVKKLWKANKEEETVDSFAAEIQILGHIRHRNIVKLLGYCSNRSVKLLLYNYIPNGNLRQLLQGNRYLDWETRYKIAVGSAQGLAYLHHDCVPAILHRDVKCNNILLDSKFEAYLADFGLAKLMSSPNYYHAMSRVAGSYGYIAPEYGYTMNITEKSDVYSYGVVLLEILSGRSAVESHVGDGVHIVEWVKRKMGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLMEVKSPPEEVGKTSQPLIKQSSNQS 1083
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g2806 1083 Pfam Leucine rich repeat 396 454 IPR001611 GO:0005515
Mibi02g2806 1083 Pfam Leucine rich repeat 106 165 IPR001611 GO:0005515
Mibi02g2806 1083 Gene3D Ribonuclease Inhibitor 481 580 IPR032675 -
Mibi02g2806 1083 Gene3D Ribonuclease Inhibitor 387 480 IPR032675 -
Mibi02g2806 1083 ProSitePatterns Protein kinases ATP-binding region signature. 792 815 IPR017441 GO:0005524
Mibi02g2806 1083 Gene3D Transferase(Phosphotransferase) domain 1 864 1076 - -
Mibi02g2806 1083 SMART serkin_6 786 1062 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g2806 1083 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 212 435 - -
Mibi02g2806 1083 Gene3D Ribonuclease Inhibitor 584 695 IPR032675 -
Mibi02g2806 1083 PANTHER RECEPTOR-LIKE PROTEIN 55 423 1059 - -
Mibi02g2806 1083 Gene3D Phosphorylase Kinase; domain 1 760 863 - -
Mibi02g2806 1083 PRINTS Leucine-rich repeat signature 634 647 - -
Mibi02g2806 1083 PRINTS Leucine-rich repeat signature 420 433 - -
Mibi02g2806 1083 ProSiteProfiles Protein kinase domain profile. 786 1076 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g2806 1083 Pfam Leucine rich repeat N-terminal domain 34 77 IPR013210 -
Mibi02g2806 1083 FunFam Putative LRR receptor-like serine/threonine-protein kinase 436 705 - -
Mibi02g2806 1083 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g34110 33 196 - -
Mibi02g2806 1083 SMART LRR_typ_2 537 560 IPR003591 -
Mibi02g2806 1083 SMART LRR_typ_2 634 661 IPR003591 -
Mibi02g2806 1083 SMART LRR_typ_2 585 609 IPR003591 -
Mibi02g2806 1083 SMART LRR_typ_2 345 369 IPR003591 -
Mibi02g2806 1083 SMART LRR_typ_2 152 175 IPR003591 -
Mibi02g2806 1083 SMART LRR_typ_2 561 584 IPR003591 -
Mibi02g2806 1083 SMART LRR_typ_2 417 441 IPR003591 -
Mibi02g2806 1083 SMART LRR_typ_2 297 321 IPR003591 -
Mibi02g2806 1083 SMART LRR_typ_2 489 513 IPR003591 -
Mibi02g2806 1083 SMART LRR_typ_2 128 151 IPR003591 -
Mibi02g2806 1083 SMART LRR_typ_2 176 200 IPR003591 -
Mibi02g2806 1083 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 767 863 - -
Mibi02g2806 1083 MobiDBLite consensus disorder prediction 1064 1083 - -
Mibi02g2806 1083 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 864 1076 - -
Mibi02g2806 1083 ProSiteProfiles Leucine-rich repeat profile. 636 658 IPR001611 GO:0005515
Mibi02g2806 1083 ProSitePatterns Serine/Threonine protein kinases active-site signature. 906 918 IPR008271 GO:0004672|GO:0006468
Mibi02g2806 1083 SUPERFAMILY L domain-like 57 405 - -
Mibi02g2806 1083 Gene3D Ribonuclease Inhibitor 194 289 IPR032675 -
Mibi02g2806 1083 SUPERFAMILY L domain-like 386 708 - -
Mibi02g2806 1083 Pfam Protein kinase domain 788 1055 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g2806 1083 SUPERFAMILY Protein kinase-like (PK-like) 770 1059 IPR011009 -
Mibi02g2806 1083 Gene3D Ribonuclease Inhibitor 34 193 IPR032675 -
Mibi02g2806 1083 Gene3D Ribonuclease Inhibitor 290 386 IPR032675 -
Mibi02g2806 1083 Pfam Leucine Rich Repeat 539 561 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g2806 Mibi-ChrMibi02 42614148 42617891 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g2806 30 1062 Receptor kinase-like Gene Family AT5G56040 45.992 0.0 864
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mibi02g2806 Pkinase 1.1e-44 CL0016