Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g2766 ATGGGCTCTCACCAGGTTAAGCCATCTAGGTCCTTGGGGAAGTTCGAATTACAAAATGGGTATGCTGCAGATGGTGGCTTTACTGCTCATAGACGATCCACGGGGCATAAATTTGATCAAAAGGACAATGGCAGGCAAAACCAGCGAGAACCCAGAAAGCATAAGGTTGAATCTGGTACTGGCAATGATCAAAAACAGGATGGTAACATTGCTGCTGGTGCAGAAAGAGCTAGAAATAATGCGAAATTGAATAGCAGAGTGGGTAAGAAGGATGCAGTCCGTAATAATTCGAAGGAATTGAGGAAGCCTTTTGAAGATGAGATGGTTGATGGATGGCCTAAATGGCTAGTTGATAACGTTCCAAGGGAAGCATTGGCTGGCTTGATTCCCAAGAGTGCTGAATCTTACATTATGATTAATAAGGTAGGGCAGGGAACTTACAGCAATGTTTATAAAGCTCGAGATCGAAACACTGGAGAATTAGTGGCCCTCAAGAAGGTGCGCCTTGACACATCAAAGCCTGAATGCATCAAATTCATGGCAAGAGAAATTATGATATTGCAGAGATTGGATCACCCCAATGTAGTAAAACTCAAAGGATTGGCTACTTCAAGAATGCATTATAGTCTTTATCTCGTTTTTGATTTCATGCAATCAGATTTGGCTAGGATAACACATCGTCGTGAAGAGAGATTAACCGAACCCCAGGTCAAGTCCTACATGCACCAATTGCTTTCAGGTCTGCAGCATTGCCATGACAGGGGAATTTTGCATAGAGACATCAAAGGGTCTAACCTTTTGATCGATAAAAGTGGGATGCTTAAGATTGCAGATTTTGGGCTTGCCAATTATTATAATCCCAACCATAATCAGCATCTCACAAGCAAGGTTGTGACACTATGGTACAGATCTCCTGAGCTTTTGTTAGGTGCTACAGATTATGGAGTTGGTGTTGATTTATGGAGTGCTGGATGCCTCCTGGCAGAAATGTTTACAGGGGCTCCAATTATGCCTGGTAGAACAGAGGTGGAGCAACTTCATAGAATTTTTAGGCTATGTGGTACACCATCAGAAGGTTATTGGAAAAAATTCAAAGCTACTGGGACATTTAAGCCTCCGAAGTCTTATAGACCCTGCCTTATAGAGACTTTCAAAGATCTGCCTCCATCTTCTTTGGGTCTACTATGTACTCTGCTTGCCTTGGACCCAGCTTACCGTGGAACTGCATCTAAAGCCCTCCAAAATCAATTTTTCGATACGAGTCCTTTGGCGTGTGACCTTTCTGGTCTTCCTGTGATCTGGGATGAGGATGAGGAGCAAAATCTAGCCGATGAACAAATCAAGCGCATGAATTCTAAACTTAGACGCTCACATACATTACTTGAGCGTCGCAAAAAAAGCATGGCACCTGAAAAGTCAGTAGAACCCTCTATATCTTCTAAAGTGGAATTAAGACAGAATGCTGATGCATACATCCCACATGAAGAACTGGGTAGCAATACCACAACAACCAGTAGTACCTTGTCAAGTTTGAATCCTACTGAGGCAAAGGATTTTTCTTCACCTATCTTCTCTCCAGATGTGCCCTCAGATCAAAAGCTGCTCCTCAAAACTCGATGTGATGATAATGGTGGCCACGGTGAAAACATCTTTAAATTCCCTCCTTTACCCAAGTTGAAATCACATGCAGTCGGATCAGAAGATACTGTGTACAGATTTCGCCCTGTTCTCAGGTCATCTTCCACCAGAGATTTCAGAACCTCAAGACAAAGGGACCGTTTACTCCGTCAATCAGATGATGAGACTGCCATAGATGACATGTAA 1824 0.4287 MGSHQVKPSRSLGKFELQNGYAADGGFTAHRRSTGHKFDQKDNGRQNQREPRKHKVESGTGNDQKQDGNIAAGAERARNNAKLNSRVGKKDAVRNNSKELRKPFEDEMVDGWPKWLVDNVPREALAGLIPKSAESYIMINKVGQGTYSNVYKARDRNTGELVALKKVRLDTSKPECIKFMAREIMILQRLDHPNVVKLKGLATSRMHYSLYLVFDFMQSDLARITHRREERLTEPQVKSYMHQLLSGLQHCHDRGILHRDIKGSNLLIDKSGMLKIADFGLANYYNPNHNQHLTSKVVTLWYRSPELLLGATDYGVGVDLWSAGCLLAEMFTGAPIMPGRTEVEQLHRIFRLCGTPSEGYWKKFKATGTFKPPKSYRPCLIETFKDLPPSSLGLLCTLLALDPAYRGTASKALQNQFFDTSPLACDLSGLPVIWDEDEEQNLADEQIKRMNSKLRRSHTLLERRKKSMAPEKSVEPSISSKVELRQNADAYIPHEELGSNTTTTSSTLSSLNPTEAKDFSSPIFSPDVPSDQKLLLKTRCDDNGGHGENIFKFPPLPKLKSHAVGSEDTVYRFRPVLRSSSTRDFRTSRQRDRLLRQSDDETAIDDM 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g2766 607 MobiDBLite consensus disorder prediction 491 525 - -
Mibi02g2766 607 ProSitePatterns Serine/Threonine protein kinases active-site signature. 256 268 IPR008271 GO:0004672|GO:0006468
Mibi02g2766 607 MobiDBLite consensus disorder prediction 581 607 - -
Mibi02g2766 607 Gene3D Transferase(Phosphotransferase) domain 1 219 461 - -
Mibi02g2766 607 Gene3D Phosphorylase Kinase; domain 1 123 218 - -
Mibi02g2766 607 MobiDBLite consensus disorder prediction 584 601 - -
Mibi02g2766 607 ProSitePatterns Protein kinases ATP-binding region signature. 142 165 IPR017441 GO:0005524
Mibi02g2766 607 ProSiteProfiles Protein kinase domain profile. 136 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g2766 607 MobiDBLite consensus disorder prediction 496 519 - -
Mibi02g2766 607 PANTHER CELL DIVISION PROTEIN KINASE 134 423 - -
Mibi02g2766 607 FunFam probable serine/threonine-protein kinase At1g54610 123 218 - -
Mibi02g2766 607 SMART serkin_6 136 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g2766 607 MobiDBLite consensus disorder prediction 23 94 - -
Mibi02g2766 607 FunFam Putative serine/threonine-protein kinase 219 456 - -
Mibi02g2766 607 Pfam Protein kinase domain 138 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g2766 607 MobiDBLite consensus disorder prediction 30 61 - -
Mibi02g2766 607 MobiDBLite consensus disorder prediction 461 480 - -
Mibi02g2766 607 SUPERFAMILY Protein kinase-like (PK-like) 131 423 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g2766 Mibi-ChrMibi02 40955300 40959524 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g2766 131 460 Core Cell Cycle Gene Families AT5G10270 42.939 4.28e-91 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Mibi02g2766 Pkinase 2.4e-68 CL0016