Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g2756 ATGACGCAACCAAACCCAGCTTCTTCGCTCTGGCTCACCACTCCGCCGCAGAAGCAGCCTCAGGAGAGGAGAAGGATGTCGCACAGGAAGTTCGAGCACCCTAGGCATGGTTCTCTGGGATTTCTCCCCAGGAAGCGAGCTGCTCGTCACAGGGGAAAAGTGAAGGCGTTCCCCAAGGATGACCCAAGCAAGCCACCCAGGCTTACTGCCTTCTTGGGTTACAAGGCAGGCATGACTCACATTGTAAGAGAGGTCGAGAAACCTGGGTCAAAACTTCACAAGAAGGAAACCTGTGAACCTGTTACAATTATTGAGACTCCTCCAATGGTTATTGTTGGAGTTGTGGGTTATGTGAAAACTCCTCGTGGTCTTCGAACATTGAGCACTGTATGGGCTCAGCACTTGAGTGAGGATGTGAAGCGTAGGTTCTATAAGAACTGGTGCAAGTCCAAGAAGAAGGCTTTCACCAAGTACTCCAAGCAGTATGAATCTGACGAAGGCAAGAAAAACATTCAGGCTCAGCTTGAGAAAATGAAGAAGTACGCCTCAGTTGTTCGTGTTTTGGCTCACACCCAGATTAGGAAAATGAAAGGTTTGAAGCAGAAGAAAGCACATCTCATGGAGATTCAGGTCAATGGTGGAACAATAGCTCAGAAGGTGGACTATGCTTACAATTTCTTTGAGAAGCAGGTTCCTGTTGATGCTGTGTTCCAGAAGGATGAGATGATTGATCTCATTGGTGTAACAAAGGGTAAGGGTTATGAAGGTGTTGTCACTCGATGGGGTGTGACCCGCCTTCCCCGCAAAACTCACAGAGGTCTGAGGAAAGTTGCTTGTATTGGTGCGTGGCATCCTGCCAGAGTTTCTTTCACAGTTGCCAGAGCTGGTCAGAATGGATACCACCACCGCACAGAGTTGAACAAGAAGGTTTACAAGCTTGGCAAAGCTGGGGATGAGTCACACACAGCTATTACTGATTTTGACAGGACTGAGAAGGACATTACTCCGATGGGTGGCTTCCCTCACTATGGTCTTGTGAATGATGACTATGTGATGATTAAGGGATGTTGTGTTGGTCCCAAGAAAAGGGTTATCACATTGCGCCAGTCCCTCCTTAAGCAGACTTCTCGTGTTGCTTTGGAGGAGATCAAGCTCAAGTTTATCGACACATCGTCCAAGTTTGGCCATGGCCGCTTCCAGACAACACAGGAGAAGCAGAAGTTTTTTGGACGTCTCAAGGCATAA 1245 0.4795 MTQPNPASSLWLTTPPQKQPQERRRMSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPPRLTAFLGYKAGMTHIVREVEKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLSTVWAQHLSEDVKRRFYKNWCKSKKKAFTKYSKQYESDEGKKNIQAQLEKMKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAQKVDYAYNFFEKQVPVDAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKVYKLGKAGDESHTAITDFDRTEKDITPMGGFPHYGLVNDDYVMIKGCCVGPKKRVITLRQSLLKQTSRVALEEIKLKFIDTSSKFGHGRFQTTQEKQKFFGRLKA 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g2756 414 MobiDBLite consensus disorder prediction 1 45 - -
Mibi02g2756 414 Pfam Ribosomal protein L3 26 395 IPR000597 GO:0003735|GO:0005840|GO:0006412
Mibi02g2756 414 Gene3D Translation factors 69 410 - -
Mibi02g2756 414 SUPERFAMILY Translation proteins 29 395 IPR009000 -
Mibi02g2756 414 ProSitePatterns Ribosomal protein L3 signature. 237 260 IPR019926 -
Mibi02g2756 414 FunFam 60S ribosomal protein L3 26 99 - -
Mibi02g2756 414 Gene3D - 108 232 - -
Mibi02g2756 414 MobiDBLite consensus disorder prediction 1 20 - -
Mibi02g2756 414 FunFam 60S ribosomal protein L3 251 299 - -
Mibi02g2756 414 Gene3D Ribosomal protein L3, domain 3 26 299 IPR044892 -
Mibi02g2756 414 FunFam 60S ribosomal protein L3 108 232 - -
Mibi02g2756 414 MobiDBLite consensus disorder prediction 21 39 - -
Mibi02g2756 414 FunFam Ribosomal protein L3 290 414 - -
Mibi02g2756 414 FunFam 60S ribosomal protein L3 69 185 - -
Mibi02g2756 414 PANTHER 60S RIBOSOMAL PROTEIN L3-RELATED 26 409 IPR045077 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g2756 Mibi-ChrMibi02 40415014 40418644 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g2756 26 412 Cytoplasmic Ribosomal Protein Gene Family AT1G43170 85.271 0.0 696