Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g2748 ATGATTTTACAAACGGTGGCGCACCAACGAAGTTCGGGTTTCACGGGCCATGATGGCGGCGCCGCCAGTGAGGAAGAAGCACTAAACCGAGCTGCTCCGGCGGCGGCGGCGGCGGCGGAGGAGGAAGACGAGGGCGTGTTTTCTGGATATAACAGTAACAGAGCAGGTGAGTTGACGGCGATGGTTTCGGCGCTGACGCATGTGGTGTCTGGATCTGGTGGTCAGGGGCGCACCGAATGGATCCCTGTGACGTCAACTATTTCTCATACTTCTCCTTTCTTGTCTTCATCCTACTCTTCTTTACCTTCTCCTGCTTCATCCTCTGTTTTAAGCTCTGCCTCTGCTTCTTCTTCCACCCCATGGGTTGGCCACAAACGATCACGTGATCAACAACAACATCCACCACAACAACAACAACAACAAAGCTCTGTCTATGGATCTTTCACTGATTTCAGAACCCCTCCTTCTCAAGGACAATCATCTTCAGTGGCGGAGGAGGCAGCGAATGTTGCGGTGGCGGGGGCGGAGGAAGGCGGCGGGGAACGGAGGAGAAGGTACAGGGGAGTGAGGCAGAGGCCGTGGGGGAAATGGGCGGCGGAGATTCGGGACCCACACAAGGCGGCGAGGGTTTGGCTTGGCACATTCGACACGGCGGAGGCGGCCGCCAGGGCTTACGACGAGGCCGCATTGAGATTCAGGGGAAACAGAGCAAAACTCAATTTCCCTGAAAATGTCAGAGTAATGCCCCCTCCTCACAATTTCCCAGCCACTCGCCTCGCCATATCGGATTCCCCGGCGGCAGCTCACAATCTCCCTCGCCCTCCCCCGCCGGCTGCGGCTCCTCCTCCGCAGCCGCAGCCGCCGTTTCTCCGGTCGCCTTCTTTTCAACCATCATCATCGGATTTGATGAGAGACTATTGGGAATACTCTCAGCTGCTTCAGAGTTCAGATGATTTCCAACAACAACAACAGCAACAGCAACAGCAGCAACATTCGAATTTATTGCAACAATGGCTGTATAGTTCACAATTGGCTGCGCTTCAATCGTCTTCTATGTTATTGTCATCTTCGCCTTTGTCTTCATCTTCTTCACCAACGGCATTTTCGCCATCCAGCCAACTATCCTCCTCTGCTTCGTATCCTCTGTTTTCCAGTCAGCAAGCAGGTTATTTCCTGCCACCGGAAGATCAACACCGCGGCGGCGGAGGAGGAGGCGGCAACGTCGGCGGCAGTTCGGACTTTCCGGCGTCAACTTGGTCCGATACCAGTGGCTACCCTCCACCTGGTTCAGGCTGA 1296 0.5517 MILQTVAHQRSSGFTGHDGGAASEEEALNRAAPAAAAAAEEEDEGVFSGYNSNRAGELTAMVSALTHVVSGSGGQGRTEWIPVTSTISHTSPFLSSSYSSLPSPASSSVLSSASASSSTPWVGHKRSRDQQQHPPQQQQQQSSVYGSFTDFRTPPSQGQSSSVAEEAANVAVAGAEEGGGERRRRYRGVRQRPWGKWAAEIRDPHKAARVWLGTFDTAEAAARAYDEAALRFRGNRAKLNFPENVRVMPPPHNFPATRLAISDSPAAAHNLPRPPPPAAAPPPQPQPPFLRSPSFQPSSSDLMRDYWEYSQLLQSSDDFQQQQQQQQQQQHSNLLQQWLYSSQLAALQSSSMLLSSSPLSSSSSPTAFSPSSQLSSSASYPLFSSQQAGYFLPPEDQHRGGGGGGGNVGGSSDFPASTWSDTSGYPPPGSG 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g2748 431 ProSiteProfiles AP2/ERF domain profile. 185 242 IPR001471 GO:0003700|GO:0006355
Mibi02g2748 431 MobiDBLite consensus disorder prediction 92 125 - -
Mibi02g2748 431 MobiDBLite consensus disorder prediction 92 189 - -
Mibi02g2748 431 MobiDBLite consensus disorder prediction 266 298 - -
Mibi02g2748 431 MobiDBLite consensus disorder prediction 1 50 - -
Mibi02g2748 431 PRINTS Ethylene responsive element binding protein signature 186 197 IPR001471 GO:0003700|GO:0006355
Mibi02g2748 431 PRINTS Ethylene responsive element binding protein signature 208 224 IPR001471 GO:0003700|GO:0006355
Mibi02g2748 431 SMART rav1_2 185 248 IPR001471 GO:0003700|GO:0006355
Mibi02g2748 431 MobiDBLite consensus disorder prediction 354 431 - -
Mibi02g2748 431 SUPERFAMILY DNA-binding domain 185 243 IPR016177 GO:0003677
Mibi02g2748 431 MobiDBLite consensus disorder prediction 132 166 - -
Mibi02g2748 431 CDD AP2 191 244 IPR001471 GO:0003700|GO:0006355
Mibi02g2748 431 MobiDBLite consensus disorder prediction 411 431 - -
Mibi02g2748 431 MobiDBLite consensus disorder prediction 269 292 - -
Mibi02g2748 431 MobiDBLite consensus disorder prediction 354 386 - -
Mibi02g2748 431 Pfam AP2 domain 185 234 IPR001471 GO:0003700|GO:0006355
Mibi02g2748 431 PANTHER DNA-BINDING DOMAIN 129 337 IPR044808 GO:0003700|GO:0009873
Mibi02g2748 431 FunFam Ethylene-responsive transcription factor 2 184 243 - -
Mibi02g2748 431 Gene3D AP2/ERF domain 184 244 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g2748 Mibi-ChrMibi02 39478395 39479863 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g2748 161 249 AP2-EREBP Transcription Factor Family AT2G33710 65.169 3.84e-35 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi02g2748 AP2 8.6e-15 CL0081