Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g2746 ATGGATCACGCCCTCCAAGCCCTCCTCGCCGCCGCCATCACCTTCTTCGTCGTCACCCTCATCTTCGCCGCCATCTTCCTCCTCTGCAAATCCCACCCCAAATCCCACCCCTACCCTCCTCCCCCTCACCGTCACCGTCACCGTCAAACCCCTCCCCCTGCCCCCAACCACACCCTAACGGACCTCCCCTCCTCCGTCACCGTTGACGCCAGCTGGTCCATCGATCCCCACCTTCAATTCACCTACGACGAAATCACCAAAGCCACCAACAATTTCTCCCCCGATCTCATCATCGGTGACGGCAGCTTCGGCCTCGTCTACAAAGCCCACCTCTCTAACGGCCTCCTCGTCGCCATCAAAAAACTCTCCCCCGATGCCTTCCAAGGTTTCCGTGAATTCCGCGCCGAAATGGAAACCCTCACCAAGCTCCGCCATCAAAACATCGTCAAGATCCTCGGCTATTGGTCGGCCGGTTCGGAGAGAATGTTGGTTTATGAGTTCCTCGAGAGAGGAAATCTCGATCAGTGGCTTCACGATCCGACGGAGCGGGCCCCACTCACGTGGGAGCTGAGGTGGAGGATAATCAGGGGCATAGCGAATGGGCTTTTGTACTTACATGGGCTGGATAAGCCCATTATACATAGGGATATTAAGGCTAGTAATGTGTTGCTGGATGCTGAGTTTGAGGCCCATATTGCGGATTTCGGGCTTGCTAGGAGGATCGATACGTCGAACTCGCACGTGTCGACGCAGTTCGCCGGGACTATGGGGTACATGCCGCCGGAGTATAGGAATGGGGTGAATGTGGCTAATGTGAAGGTGGATGTGTATAGTTTCGGGGTTTTGATGCTGGAAACTGCAACGGGCCGGCGGCCCAATCTGTCAGTGAGGTTCGAGGATAAGGATATTGGGCTTGTACAATGGGCCGGGAAAATGGAGGCCCAGAACTCCCTAATGGAGATGGTTGATGTCAATATATCAAGAGAAGGGATGAGTGAAGATCATGTGAAGGAGTACTTTAGGATTGCTTGTAAATGTACCAGTGAATTACAGAAAGATAGACCTGTGATGCAAGAGGTTGTGGAATTGTTTGAGAAGATGGCCGCGTAA 1110 0.536 MDHALQALLAAAITFFVVTLIFAAIFLLCKSHPKSHPYPPPPHRHRHRQTPPPAPNHTLTDLPSSVTVDASWSIDPHLQFTYDEITKATNNFSPDLIIGDGSFGLVYKAHLSNGLLVAIKKLSPDAFQGFREFRAEMETLTKLRHQNIVKILGYWSAGSERMLVYEFLERGNLDQWLHDPTERAPLTWELRWRIIRGIANGLLYLHGLDKPIIHRDIKASNVLLDAEFEAHIADFGLARRIDTSNSHVSTQFAGTMGYMPPEYRNGVNVANVKVDVYSFGVLMLETATGRRPNLSVRFEDKDIGLVQWAGKMEAQNSLMEMVDVNISREGMSEDHVKEYFRIACKCTSELQKDRPVMQEVVELFEKMAA 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g2746 369 SUPERFAMILY Protein kinase-like (PK-like) 72 364 IPR011009 -
Mibi02g2746 369 SMART serkin_6 92 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g2746 369 FunFam Phytosulfokine receptor 2 56 167 - -
Mibi02g2746 369 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 5 366 - -
Mibi02g2746 369 FunFam Phytosulfokine receptor 2 168 368 - -
Mibi02g2746 369 ProSitePatterns Protein kinases ATP-binding region signature. 98 121 IPR017441 GO:0005524
Mibi02g2746 369 MobiDBLite consensus disorder prediction 37 51 - -
Mibi02g2746 369 ProSiteProfiles Protein kinase domain profile. 92 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g2746 369 Pfam Protein tyrosine and serine/threonine kinase 98 363 IPR001245 GO:0004672|GO:0006468
Mibi02g2746 369 Gene3D Phosphorylase Kinase; domain 1 58 167 - -
Mibi02g2746 369 MobiDBLite consensus disorder prediction 37 57 - -
Mibi02g2746 369 ProSitePatterns Serine/Threonine protein kinases active-site signature. 212 224 IPR008271 GO:0004672|GO:0006468
Mibi02g2746 369 Gene3D Transferase(Phosphotransferase) domain 1 168 368 - -
Mibi02g2746 369 CDD STKc_IRAK 98 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g2746 Mibi-ChrMibi02 39370975 39372084 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g2746 76 367 Receptor kinase-like Gene Family AT5G07280 44.898 4.91e-69 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Mibi02g2746 PK_Tyr_Ser-Thr 5.8e-45 CL0016