Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g2714 ATGCTCGAGAAACTTTCAGGGCCAGTGTTAGTACTCGGTTCACAGATAATAGATTCAGAAGATGAATGCTCAGAAGTTGATAAAAGGCTCGCAAATTTATTTCCTTACAATATTGAGATTAAACCACCAGAAGATGAGACGAGTCTTGGAAACTGGAAGGCCCAACTGGAAGAGAACATGAAAATAATTCAGTTTCAAAACAACAAAACACACATTACTGAAGTACTTGAGGCAAATGATATTGAATGCAATGACTTGAATTCAATCTGTCGTGCAGACACAATGATACTAAGTAAATATATTGAAGAAATTGTGGTTTCTGCAATACGTTACCACTTGACGAATACCAAGGATCCAGAATACCGAAATGGGAAGCTGCTAATATCATCTGAGAGCTTGTCCCATGGTTTAAATCTATTTCAAGAAGTCAAAAGTACTGCTGAGGATACCCTGAAGCCGGAGACTAGTGGAAACAAGGAAGTTCCTCCCGACAATGAGTTTGAGAAGCGCATTAGACAGGAGGTCATCCCTGCAAATGAGATCGGAGTTACATTTGAAGATATTGGTGCATTAGATGAAATTAAAGAGTCACTCCAAGAACTGGTCATGCTTCCCCTTAGAAGGCCAGATCTCTTTAAAGGTGGACTTCTTAAGCCTTGTAGAGGTATATTGCTCTTTGGACCTCCAGGTACTGGAAAAACAATGCTAGCAAAGGCCATTGCAAATGAAGCTGGAGCAAGCTTTATGAATGTCTCAATCTCTACCATCACTTCAAAATGGTTTGGAGAAGATGAGAAAAATGTCCGAGCTCTATTCACATTGGCAGCAAAGGTTGCTCCAACTATTATTTTTGTTGATGAGGTTGACAGCATGCTCGGGCAGCGATCGAGATGTGGAGAACATGAGGCCACGAGGAAGATTAAAAATGAATTCATGACTTACTGGGATGGTCTATTGACAAAACCTGGGGAGCAAATTCTTGTCCTTGCTGCAACAAACAGGCCATTTGATCTGGATGAAGCAATCATACGACGTTTTGAGCGAAGGCAAGTCATCATAGTTTGAATCATGGTTGGCCTTCCATCTGTTGAGAACAGGGAAATGATCTTGAAGACTCTACTAACTAAGGAAAAGACTGAAAATTTAGATTTGAAAGAACTTGCTGTCATGACAGAAGGATACAGTGGAAGTGATCTGAAGAATTTGTGCACAACTGCTGCTTATCGACCTGTTAGGGAGCTCTTAAAGCAGGAGAGGTTGAAAAATAAGGTAGTGTTACTAAACAACCTTTACACTGAAAAGAGTGAAAAAGTGGCAGAAGGACAAAGCTCAATGGATGCTTCAGATATTAAGGAGGGTGGAGAAGAGACAGTATACACCTTGAGGGCTTTAAACATGGAAGACATGAGACAGGCTAAGAGTCAGGTTGCTGCAAGTTTTGCTGCTGAAGGATCAATAATGGCTGAGCTGAAGGAGTGGAATGAGCTATATGGAGAAGGAGGTTCAAGAAAGAAACAGCAACTCACTTACTTCCTTTAG 1539 0.4087 MLEKLSGPVLVLGSQIIDSEDECSEVDKRLANLFPYNIEIKPPEDETSLGNWKAQLEENMKIIQFQNNKTHITEVLEANDIECNDLNSICRADTMILSKYIEEIVVSAIRYHLTNTKDPEYRNGKLLISSESLSHGLNLFQEVKSTAEDTLKPETSGNKEVPPDNEFEKRIRQEVIPANEIGVTFEDIGALDEIKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFMNVSISTITSKWFGEDEKNVRALFTLAAKVAPTIIFVDEVDSMLGQRSRCGEHEATRKIKNEFMTYWDGLLTKPGEQILVLAATNRPFDLDEAIIRRFERRQVIIVXIMVGLPSVENREMILKTLLTKEKTENLDLKELAVMTEGYSGSDLKNLCTTAAYRPVRELLKQERLKNKVVLLNNLYTEKSEKVAEGQSSMDASDIKEGGEETVYTLRALNMEDMRQAKSQVAASFAAEGSIMAELKEWNELYGEGGSRKKQQLTYFL 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g2714 512 Gene3D - 182 360 IPR027417 -
Mibi02g2714 512 Pfam ATPase family associated with various cellular activities (AAA) 223 350 IPR003959 GO:0005524|GO:0016887
Mibi02g2714 512 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 2 511 - -
Mibi02g2714 512 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 416 IPR027417 -
Mibi02g2714 512 CDD AAA 221 352 - -
Mibi02g2714 512 Pfam AAA+ lid domain 381 417 IPR041569 -
Mibi02g2714 512 Gene3D - 361 422 - -
Mibi02g2714 512 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 182 360 - -
Mibi02g2714 512 ProSitePatterns AAA-protein family signature. 326 345 IPR003960 GO:0005524|GO:0016887
Mibi02g2714 512 SMART AAA_5 219 358 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g2714 Mibi-ChrMibi02 38285519 38288585 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g2714 183 420 Calmodulin-binding Proteins AT3G56690 39.669 1.30e-43 164