Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g2712 ATGTTTAGTGTGATGTATAAGTCATCAACACAGGCATTTCGCATCCATGCCCAGGTACAGAGGTTTTCAAAGTTGCAGGTGGCTTCTGCAATGGTGAATGGCTGTCTTGGGTTTGTTCATTTGTTTTTAGGAATTTGGGTCTTAGAGGAGAAATTGAGGAAAAGTCATGTTGCCTTTCCTATCCATTTGTGGTTTCTAGAGTTTTTTCAGGGGTTTACATGGTTGTTGGTGGGTTTAACAGCAAGCCTTAGGTTGAGAGACCTTTCAAAACCATGGTTGAAGATGTTGTCTATTCTTTTCTTCTTAGGTTCTGGTATTTTCTGTGTTATTTCCATTTTGTATGTCACTAGTGGCGGAGAAATGTCACTTAAGGCAGCTTTAGATGCTGCATCTTTTCCAGGAGCAATATTGTTGCTCATATGCACTTATAAGGGATCTAGCTATGCAGCCAATGATGAGAAAATTCATGAAAGCCTTTATACTCCTTTAAATGGTGACCAGTCCACTGATGTTGGTAAAACTATTTCTTCCAATGATGTTGTAACTCCATTCGCCACAGCTGGATTCATCAGCAAAATGACGTTTGGGTGGATGAATCCATTGATGAAAAAGGGTAAGGAGAAAACACTTACAGAGGAAGACATCCCAAAGTTGCGGCAGGAAGACCAAGCTGAAAGTTGTTATTTCACATTTTTGGATCAATTGAACCGACAGAAACAGAGAGAACCATCGTCGCAGCCATCACTTTTGCGGACAATATTGTTGTGCCATTGGAAAGATATATTGTTATCTGGATTTTTTGCATTGCTGAAGGTAATTACTATCTCTGCCGGTCCAGTGCTTCTGAATTCTTTCATACTGGTTGCTGAGGGTAAAGGGAGTTTCAAATATGAAGGGTATGTATTGGCTATATCACTTTTCCTTACCAAGATCATAGAGTCAGTATCACAAAGGCAGTGGTTCTTCCTGAGCAGACTCACCGGTTTGAAAGTTAGATCATTTATTACTGCAGCCGTTTATAAAAAGCAATTACGGATATCTAATGCTTCAAAGTTGGTGCATTCAGGTGGTGAGATTATGAATTATGTGACCGTAGATGCTTATAGAATTGGAGAATTCCCGTTTTGGTTTCACCAGATTTGGACTACTAGTCTTCAACTGTGCATTTCATTAGTTATTCTATTCCATGCCGTGGGGCTAGCAACATTTGCAGCCTTGGCAGTGATAATCCTCACTGTGCTTTGCAATACTCCACTTGCAAAGTTACAGCATAAGTATCAAACCAAACTTATGGTGGCACAGGATGAAAGATTGAAGGCTAGTTCTGAGGCTTTAGTGAATATGAAAGTACTAAAACTATATGCATGGGAAACCCATTTCAAGAGAGCTATAGAAAGTTTGAGGAAAGTGGAGCTGAAGTGTTTGTCTGCACTACAGATGAGAAAGGCATACATCACCTTTCTCTTTTGGTCTTCACCTATTATGGTCTCTGCTGCTTCATTTGGGGCATGTTACTTCCTCAAAATTCCCTTACATGCAAATAATGTTTTCACCTTTGTGGCTAGTTTACGCCTTGTTCAAGATCCAATCAGGACCATGGCTGATGTTATTGGGATGCTCATTCAAGCAAAAGTGGCATATGCTCGGATTGTGAAGTTCCTTGAGGCACCAGAGCTACCGAATGCAAATGTCAAAAAGAGGAGCTTAAGTGACAGTCTCAAAGGCTCCATCCTAATCAACTCAGCTGACTTTTCTTGGGAAGATAATGTATCAAAGCCCATTCTGAAAAACATAAATCTCACTGTAAAACCTGGGCAAAAGGTGGCTATTTGTGGAGAAGTTGGTTCCGGCAAATCAACCCTATTAGCTGCAATTCTTGGCGAGGTTCCTAATACTCGCGGAACTATGGAAGTTCATGGAAAGTTTGCTTATGTTTCTCAAACGGCATGGATACAAACTGGTACAGTGAGGGATAATATCTTGTTTGGTTCAGCCATGGATGCTCAAAGGTATCAGGAAACACTTGAAAGGTCATCCTTAGTGAAGGACCTAGAATTGTTTCCCCATGGTGATTTCACTGAAATAGGGGAGAGAGGAGTAAACTTGAGCGGAGGTCAGAAGCAGCGAATTCAACTTGCTCGTGCTCTTTATCAGAATGCTGATATATATCTCTTGGACGATCCATTCAGTGCGGTTGATGCACATACTGCCACAAATTTGTTTAATGAATATGTCATGGATTCACTTCAGGGAAAGACAGTCTTACTTGTGACTCATCAAGTTGACTTCCTTCCAGCATTTGATTCTATTTTGCTCATGTCTAATGGACAAATCCAACAAGCTGCCTCATATGACCACCTACTGTCTTCAAGCGAGGAATTTCAAGACCTTGTCAATGCTCATAAGGAGACTGCTGGTTCTGAAAGACTTTTGAATGTGACATCTGCTCAGACACGGCCAAGTTCTGCTAAGGATATTATTAAATCTTATGTGGAGAAGGAATTCAAGGCTTCAAATGGCGACCAGTTAATTAAGCAAGAAGAAAGAGAAACAGGAGACAATGGGCTAAAGCCGTACTTTCAATATCTGAATCAGAGCAAGGGTTTTCTATACTTTGGCATTGCTGCCCTTTCCCATCTTATATTTGTGATTGGCCAGGTATTACAGAACTCATGGATGGCTGCTAATGTTGACAATCCTCAAGTTACCCCGTCGCGATTGATCTCGGTGTACTTGTTGATTGGAGTGGTTTCAACAATTTTCTTGCTGTCCAGAGTTTTCGGAGTAGTTGCTATGGGTCTTCATTCATCAACTTCTTTGTTCGCACAGCTAGTGAACTCCCTTTTCCACGCCCCTATGGCTTTTTATGACTCCACACCATTAGGAAGGATACTTAGTAGGGTCTCATCTGATCTGAGCATTGTTGATCTTGATGTCCCGTTCACCCTTATGTTTGCTGTTGGAGCCACTACAAATTTATATGCTAATCTTATTGTTCTAGCAGTTGTTACTTGGCAAGTCTTGTTTATCTCTATACCGATGCTTTACGTGGCAGTTCTCTTGAAGAGATACTACTTTGCCTCTGCTAAAGAGTTGATGAGACTGAATGGCACAACAAAATCCTTTGTAGCCAATCATGTAGCAGAGTCTGTTGCTGGTGCCATGACAATAAGAGCTTTTGAGGAGGAAGAACGCTTCTTTGCCAAGAATCTTGAGTTAATTGATGTCAATGCTTCTCCTTTCTTCCATAATTTTGTGGCAAGTGAGTGGTTGATTCAACGTTTAGAAACAGTCAGTGCTGTGGTCCTTGCCTCAGCAGCACTTTGCATGGTGGTACTCCCACCTGGGACTTTCACCTCTGGATTTATTGGCATGGCTCTCTCTTATGGTCTTTCATTAAATGTATCCCTTGTATTCTCTATTCAAAGAGAGTGCATAATTGCAAATTACATTATATCAGTAGAGAGGCTGAAACAATACATGCATATACCAAGTGAGGCTCCGGAAATAATAGAAGGAAATCGCCCTCCCGTGAATTGGCCTACAGTGGGCAAAGTAGAAATAGATGATCTGCAGATAAGGTATAGGCCTGATACACCTCTTGTACTTCGAGGAATTACATGCACAATTGAAGGAGGACACAAGATTGGCATTGTTGGCAGAACAGGTAGTGGAAAGTCTACTCTTTTAGGTGCTTTGTTCCGCCTTGTGGAGCCGACAGGTGGAAAGATTATTGTTGATGGCATAGACATTTGTTCTATTGGACTCCATGATTTGAGGTCACGTTTCGGTATCATACCCCAAGATCCCACTCTTTTTAATGGCACGGTTAGATTTAACATGGACCCCTTATCTCAGCACTCAGATCAAGAGATATGGAAGGTTCTTGGCAAGTGTCAGTTGCAAGAAGCTGTTCAAGAGAAAGAAGGCGGTTTAGACTCTTCAGTTGTGGGAGATGGGTCAAACTGGAGCATGGGGCAGCGGCAGCTATTCTGTTTGGGGCGTTCTCTTTTGAGGAGAAGTCGGGTTTTGGTGCTCGATGAAGCAACCGCGTCTATTGATAATGCCACTGATTTGATTCTGCAGAAAACTATAAGGAGTGAATTTGCTGATTGTACTGTGATCACAGTCGCACACAGGATACCGACAGTGATGGATTGCACTAAGGTTATGTCCATCAATGATGGAAAATTGGTGGAGTATGATGAGCCAACCAAATTGATGAAGAGAGATGACTCTCTGTTTGGACAGCTTGTGAAGGAATATTGGTCTCATCTTCATTCTGCAGAATCACACTGA 4299 0.4161 MFSVMYKSSTQAFRIHAQVQRFSKLQVASAMVNGCLGFVHLFLGIWVLEEKLRKSHVAFPIHLWFLEFFQGFTWLLVGLTASLRLRDLSKPWLKMLSILFFLGSGIFCVISILYVTSGGEMSLKAALDAASFPGAILLLICTYKGSSYAANDEKIHESLYTPLNGDQSTDVGKTISSNDVVTPFATAGFISKMTFGWMNPLMKKGKEKTLTEEDIPKLRQEDQAESCYFTFLDQLNRQKQREPSSQPSLLRTILLCHWKDILLSGFFALLKVITISAGPVLLNSFILVAEGKGSFKYEGYVLAISLFLTKIIESVSQRQWFFLSRLTGLKVRSFITAAVYKKQLRISNASKLVHSGGEIMNYVTVDAYRIGEFPFWFHQIWTTSLQLCISLVILFHAVGLATFAALAVIILTVLCNTPLAKLQHKYQTKLMVAQDERLKASSEALVNMKVLKLYAWETHFKRAIESLRKVELKCLSALQMRKAYITFLFWSSPIMVSAASFGACYFLKIPLHANNVFTFVASLRLVQDPIRTMADVIGMLIQAKVAYARIVKFLEAPELPNANVKKRSLSDSLKGSILINSADFSWEDNVSKPILKNINLTVKPGQKVAICGEVGSGKSTLLAAILGEVPNTRGTMEVHGKFAYVSQTAWIQTGTVRDNILFGSAMDAQRYQETLERSSLVKDLELFPHGDFTEIGERGVNLSGGQKQRIQLARALYQNADIYLLDDPFSAVDAHTATNLFNEYVMDSLQGKTVLLVTHQVDFLPAFDSILLMSNGQIQQAASYDHLLSSSEEFQDLVNAHKETAGSERLLNVTSAQTRPSSAKDIIKSYVEKEFKASNGDQLIKQEERETGDNGLKPYFQYLNQSKGFLYFGIAALSHLIFVIGQVLQNSWMAANVDNPQVTPSRLISVYLLIGVVSTIFLLSRVFGVVAMGLHSSTSLFAQLVNSLFHAPMAFYDSTPLGRILSRVSSDLSIVDLDVPFTLMFAVGATTNLYANLIVLAVVTWQVLFISIPMLYVAVLLKRYYFASAKELMRLNGTTKSFVANHVAESVAGAMTIRAFEEEERFFAKNLELIDVNASPFFHNFVASEWLIQRLETVSAVVLASAALCMVVLPPGTFTSGFIGMALSYGLSLNVSLVFSIQRECIIANYIISVERLKQYMHIPSEAPEIIEGNRPPVNWPTVGKVEIDDLQIRYRPDTPLVLRGITCTIEGGHKIGIVGRTGSGKSTLLGALFRLVEPTGGKIIVDGIDICSIGLHDLRSRFGIIPQDPTLFNGTVRFNMDPLSQHSDQEIWKVLGKCQLQEAVQEKEGGLDSSVVGDGSNWSMGQRQLFCLGRSLLRRSRVLVLDEATASIDNATDLILQKTIRSEFADCTVITVAHRIPTVMDCTKVMSINDGKLVEYDEPTKLMKRDDSLFGQLVKEYWSHLHSAESH 1432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g2712 1432 FunFam ABC transporter C family member 10 561 813 - -
Mibi02g2712 1432 ProSitePatterns ABC transporters family signature. 702 716 IPR017871 GO:0005524|GO:0016887
Mibi02g2712 1432 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 262 542 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi02g2712 1432 SMART AAA_5 604 777 IPR003593 -
Mibi02g2712 1432 SMART AAA_5 1212 1396 IPR003593 -
Mibi02g2712 1432 FunFam ABC transporter C family member 3 1169 1421 - -
Mibi02g2712 1432 Gene3D ABC transporter type 1, transmembrane domain 833 1167 IPR036640 GO:0005524|GO:0016020
Mibi02g2712 1432 Pfam ABC transporter 1203 1351 IPR003439 GO:0005524
Mibi02g2712 1432 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 572 800 IPR027417 -
Mibi02g2712 1432 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1186 1420 IPR003439 GO:0005524
Mibi02g2712 1432 SUPERFAMILY ABC transporter transmembrane region 858 1166 IPR036640 GO:0005524|GO:0016020
Mibi02g2712 1432 CDD ABC_6TM_ABCC_D1 263 550 IPR044746 GO:0140359
Mibi02g2712 1432 SUPERFAMILY ABC transporter transmembrane region 250 555 IPR036640 GO:0005524|GO:0016020
Mibi02g2712 1432 CDD ABCC_MRP_domain2 1184 1404 - -
Mibi02g2712 1432 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 880 1137 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi02g2712 1432 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 184 1420 - -
Mibi02g2712 1432 CDD ABCC_MRP_domain1 577 777 - -
Mibi02g2712 1432 Gene3D - 1170 1421 IPR027417 -
Mibi02g2712 1432 Pfam ABC transporter 595 729 IPR003439 GO:0005524
Mibi02g2712 1432 Pfam ABC transporter transmembrane region 870 1110 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi02g2712 1432 Pfam ABC transporter transmembrane region 262 528 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi02g2712 1432 Gene3D - 553 819 IPR027417 -
Mibi02g2712 1432 Gene3D ABC transporter type 1, transmembrane domain 250 552 IPR036640 GO:0005524|GO:0016020
Mibi02g2712 1432 CDD ABC_6TM_ABCC_D2 868 1161 IPR044726 GO:0140359
Mibi02g2712 1432 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 579 800 IPR003439 GO:0005524
Mibi02g2712 1432 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1176 1413 IPR027417 -
Mibi02g2712 1432 FunFam ABC transporter C family member 5 835 1167 - -
Mibi02g2712 1432 FunFam ABC transporter C family member 10 245 558 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g2712 Mibi-ChrMibi02 38220881 38227496 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g2712 571 829 Calmodulin-binding Proteins AT2G36910 30.576 3.58e-28 122