Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g2710 ATGCATTCACTCTCTTTGCGTTTCTTGTGCGTACATTTCTTTTTCTTCATCACCATCACCTTCAATTTCCCCTCACTTTCTGTACCTTTCTTGCCCACAGAAAACATAACCCTCTTTGGTGACGCAAGTTTCAGAAATAACGCCATTAGTCTTACCCAAGAACTCAAATGCCACCGCCATTCTTCTTCATCTGGGGTTGGAAGGGCTTTCTATGTAAACCCAATTCGATTTCTTGATTCTGAAACCAACAGTACGGCTTCTTTCTCTTGCCGCTTCACTTTTTCAATTGTGTCTTCCCCTTCTTGTCGTTCTGGTGATGGCATTGCCTTCATGATTATCTCTGACACCGACTTGGTAAGCTTCTCTCGTGGCTATATGGGTCTTCCATCTCTATCTGTTAATCAGCAAGATTCTTATTTTGCTGTGGAATTTGACACCAATTTTGACCCTTCAGTGGGTGACATTAATGGGAATCACATTGCTATTGATGTTGATACAATCATATCTATAGCCTCAGTGGATGCTATTTCTGAGGGGATCGATCTCAAGAGTGGGAGAAAAATTAATGCTTGGATTGAGTACAGAGATGCCCAGAAAATGGTTCGTGTATGGGTGAGTCACTCTCCAGTTCGGCCTTCAACGCCTATTTTGGATGCTGAGATTGACCTCTCTGATAAACTTAAGGAGTTTATGCATGTGGGTTTCTCTGCCTCCAACGTGATGGGTTCAGGTATTCATACTATCGATCATTGGCAATTCAAAACTTTTGGGTTTATTAGTTCAGTGAATTCTGTGGATATGGTAGATGAAGGAGACTGTTTCTTTTGTTATCCGGAGAATTCTGACCCAGCTACTCAACACCTAGATAAATTTCACTTTATGAAAGAAAATCTCAGGGAGAAGTCTTTTGGGCTGGGAGGCATTACTGCATTTATAGTCTCTGTATTTGTAATCTGCGTATTTTTGTGTAAGAGAAAAAAGGCAGGTGTTATAAATTCTCTGAGAGATGGGCAACATTGTGAATTCCAAAGCACAAAGCTCCCCTCAAGATTGTCACTCTCTGAAATCAAATCAGCCACAAGGGGATTCAGTAGTGACAGACTTGTTGGGGAAGGAACATCGGCAAAAGTGTATAAAGGGTCTCTTGCACATGGGGGAGATATTGCTGTGAAAAGATTTGTGAAGGATAATGGCTGTAATAGCATAGACTATTTGCACAATCCTTTTTCCAATGAGTTCGCCACCATGGCAGGCTGCTTAAGGCACAAGAACTTGGTTCAGTTTCAAGGATGGTGCGTTGAAGGGTCTGAGTTACTTCTTGTCTATGAGTATCTACCTAATGGTAGCCTCAACAGAATCCTACACAAGAACTACGACTCTTTGGTGGTTCTTTCATGGAAACAAAGGATGAACATAGTTCTTGGGGTTGCTTCTGCCCTCACTTATCTTCATGAAGAGTGTGAGAGACAAATCATTCACAGAGATGTGAAGACCTGCAATATAATGCTTGATGGAGATTTCAATGCCAAGCTCGGTGATTTTGGTCTGGCACAAGTCTATGAGCATAGTTGTGACACGAGAGAAGCTACTTTACCTGCAGGAACAATGGGGTACCTTGCACCTGAATATGTATATTCCGGTGTTCCAACTGTGAAGACTGACGTGTACAGCTTTGGCATAGTGGTGCTAGAAGTGGCTACTGGGAGGAAGCCTGTGGAAGATGATGGAACTGTGGTTGTAGATTACGTGTGGAAGAAGTGGGAAAAGAGAAAGTTGGTTGAAGCTGGAGATCCGAGGTTAATGGGGAAGTTTGATGTGCAAGAGATGGAGAGGATGCTCATGGTGGGGCTTATATGTGTGCACCCAGACCATGAGAACAGGCCAAGAGTGAGAGATGCAACCAGGATTCTCAAGGGTGAAGCACCACTTCCATTGTTACCTTCATGTAAACCAAGGGTGAGAATTAGGCCTGTTTTACCAAATGATACTGAAGAAATATTGAATGTTATAGGAAACAGACCCAGTATTGATGAGGCTTCCTATTTGACCCCAAGGAGCCGCTTTAACTAA 2070 0.4266 MHSLSLRFLCVHFFFFITITFNFPSLSVPFLPTENITLFGDASFRNNAISLTQELKCHRHSSSSGVGRAFYVNPIRFLDSETNSTASFSCRFTFSIVSSPSCRSGDGIAFMIISDTDLVSFSRGYMGLPSLSVNQQDSYFAVEFDTNFDPSVGDINGNHIAIDVDTIISIASVDAISEGIDLKSGRKINAWIEYRDAQKMVRVWVSHSPVRPSTPILDAEIDLSDKLKEFMHVGFSASNVMGSGIHTIDHWQFKTFGFISSVNSVDMVDEGDCFFCYPENSDPATQHLDKFHFMKENLREKSFGLGGITAFIVSVFVICVFLCKRKKAGVINSLRDGQHCEFQSTKLPSRLSLSEIKSATRGFSSDRLVGEGTSAKVYKGSLAHGGDIAVKRFVKDNGCNSIDYLHNPFSNEFATMAGCLRHKNLVQFQGWCVEGSELLLVYEYLPNGSLNRILHKNYDSLVVLSWKQRMNIVLGVASALTYLHEECERQIIHRDVKTCNIMLDGDFNAKLGDFGLAQVYEHSCDTREATLPAGTMGYLAPEYVYSGVPTVKTDVYSFGIVVLEVATGRKPVEDDGTVVVDYVWKKWEKRKLVEAGDPRLMGKFDVQEMERMLMVGLICVHPDHENRPRVRDATRILKGEAPLPLLPSCKPRVRIRPVLPNDTEEILNVIGNRPSIDEASYLTPRSRFN 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g2710 689 Pfam Protein kinase domain 364 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g2710 689 Gene3D Phosphorylase Kinase; domain 1 326 444 - -
Mibi02g2710 689 SUPERFAMILY Protein kinase-like (PK-like) 343 637 IPR011009 -
Mibi02g2710 689 SUPERFAMILY Concanavalin A-like lectins/glucanases 19 255 IPR013320 -
Mibi02g2710 689 CDD STKc_IRAK 369 639 - -
Mibi02g2710 689 CDD lectin_legume_LecRK_Arcelin_ConA 35 257 IPR001220 GO:0030246
Mibi02g2710 689 Pfam Legume lectin domain 20 255 IPR001220 GO:0030246
Mibi02g2710 689 Gene3D - 18 265 - -
Mibi02g2710 689 ProSitePatterns Serine/Threonine protein kinases active-site signature. 491 503 IPR008271 GO:0004672|GO:0006468
Mibi02g2710 689 Gene3D Transferase(Phosphotransferase) domain 1 445 641 - -
Mibi02g2710 689 FunFam L-type lectin-domain containing receptor kinase S.6 326 444 - -
Mibi02g2710 689 ProSitePatterns Protein kinases ATP-binding region signature. 369 391 IPR017441 GO:0005524
Mibi02g2710 689 FunFam L-type lectin-domain containing receptor kinase VIII.1 445 655 - -
Mibi02g2710 689 ProSiteProfiles Protein kinase domain profile. 363 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g2710 689 PANTHER - 46 644 - -
Mibi02g2710 689 SMART serkin_6 363 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g2710 Mibi-ChrMibi02 37961628 37963697 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g2710 11 689 Receptor kinase-like Gene Family AT5G42120 53.617 0.0 718
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Mibi02g2710 Pkinase 4.8e-41 CL0016