Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g2705 ATGGCGAGGGAGAAGCTATACGTCACTGTTCCGAGTCTCTTCCGTTGTCCGATCTCAATGGACGTGATGAGGTCTCCGGTAAGCCTCTGTACCGGCGTCACATACGATCGCTCCAGTATTCAACACTGGCTTGACTCCGGCCACGACACGTGTCCTGCGACCATGCAAGTCCTCTCATCCAAAGACTTCATCCCAAACCTCACTCTCCACCGACTCATTCAGAATCTGAAGCTTTCACCTTCACATTCCTCTCCATGCAAAATCTCCACCGAACAGGTAAAGTCCCTCATCCATGGAATTCATCACCAAAATAATGACCATATTTCTGATTCACTCTCCAAGATCGTTGAATTCTTTAGTTACTCGAACGAGAATCGGATTTTCTTGTCAAATTTCCCTGAGTTTGAGTCGTTGATCGTTCGAGTCCTTGTTAAGGAAGGCTCCCACGTTGAGATTTCAGAGATGGTGATTAGAGTTTTGAGTTCCATTATTCAGGAAGAAAATGGAGTCAAAGAACGAGTTCGTCGTTTGATTTTTGATGTTAATCGGGATTGCCTATCTTCGATTGTGTCCATTTTTCAAAACGCAAAGTCTCAGATTTCGAAGGTTGAATCTGCGAGGTTCCTCGAATCTTTTGCCGGTGATTTTCAATCGAATCGGTCAATCGCCGAGTCACCAGGTCTTTTGTCCGTACTCGTCCACCTACTACGCGAAGAAAACAAAGACAATAAAAGCTCCGAACTAAACGACGCCGTTTTATCTCTCTTACTATCCGTGTCAACGACTCAGTCAACCAAAACAGAACTCGTCCGATTCGGACTCGTTCCAATATTGACCAAGTCAATACAGAATCAACCATCATCATCAACAACAACAATCTCTAGCAATTCAACCAATGAGAATTCCCTGAGATTGCTGGCCATGCTTTCGACGTGTGCCGCCGGCAGGCGGGCGATCGCGGAGGAGCCGGGATGCGTGGAGGCGGTGACGGAGAGGCTGGTGAAGGCGTCGAAGGCGGAGACGGAGGATGCGGTGGTGGTGCTGTGGGGTTTGTGTTGTGGGAATAGTAAGAATGGAAAAGTGCAAGAGAAGGTGGTAATGAGCAATGGTGTGATGAAGATACTTCTTGTGCTTCAAAGGGATTGTGAAGATCATGTGAGGAAGATGTGTGGGGATTTGGTTAAGGTTCTGAGAATGGTGTCCACGGATGGATTGAGTAGCTATGAGACAAAAACCACTCATATTAAGCCCTGCTAG 1257 0.4686 MAREKLYVTVPSLFRCPISMDVMRSPVSLCTGVTYDRSSIQHWLDSGHDTCPATMQVLSSKDFIPNLTLHRLIQNLKLSPSHSSPCKISTEQVKSLIHGIHHQNNDHISDSLSKIVEFFSYSNENRIFLSNFPEFESLIVRVLVKEGSHVEISEMVIRVLSSIIQEENGVKERVRRLIFDVNRDCLSSIVSIFQNAKSQISKVESARFLESFAGDFQSNRSIAESPGLLSVLVHLLREENKDNKSSELNDAVLSLLLSVSTTQSTKTELVRFGLVPILTKSIQNQPSSSTTTISSNSTNENSLRLLAMLSTCAAGRRAIAEEPGCVEAVTERLVKASKAETEDAVVVLWGLCCGNSKNGKVQEKVVMSNGVMKILLVLQRDCEDHVRKMCGDLVKVLRMVSTDGLSSYETKTTHIKPC 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g2705 418 SUPERFAMILY ARM repeat 182 397 IPR016024 -
Mibi02g2705 418 SUPERFAMILY RING/U-box 6 78 - -
Mibi02g2705 418 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 9 81 IPR013083 -
Mibi02g2705 418 ProSiteProfiles U-box domain profile. 9 83 IPR003613 GO:0004842|GO:0016567
Mibi02g2705 418 Pfam U-box domain 10 75 IPR003613 GO:0004842|GO:0016567
Mibi02g2705 418 FunFam RING-type E3 ubiquitin transferase 10 82 - -
Mibi02g2705 418 CDD RING-Ubox_PUB 14 56 IPR045210 -
Mibi02g2705 418 SMART Ubox_2 13 76 IPR003613 GO:0004842|GO:0016567
Mibi02g2705 418 Gene3D - 83 406 IPR011989 -
Mibi02g2705 418 PANTHER WDSAM1 PROTEIN 9 400 IPR045185 GO:0061630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g2705 Mibi-ChrMibi02 37744020 37745276 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g2705 7 417 U-box Gene Family AT3G18710 40.515 2.36e-85 265