Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g2697 ATGGACAAAGCAACATTACCTTCCCTCTCATCTACTATTTCTAAATATCAGGTTTTGCAGTCGATGGTGAACGATAACAAGCCTATCAAAGAAGAAGAAGAGGCGCAGAAACAGAAAGCTCCTTTAGAGAATGGGAATTCAATTATCAAACCCACAATCTCTGAGTTCAGTGGGGTGCACACTGAGGAAAAGTTGGCTCACGTGATTGGTTGCTATGTGGAGTCTCTAACTCATTTAAAAGATCGTTGTCTTGGGTATCCAGCTAATCAAGACTTGAACTACGAAGCATTGAAGCAGTTGATATGTTTTCGTTTAAACAATGCTGGTGATCCATTTATAGGGAGTAGCTACATGTTTAATTCATATCCGTTTGAACTGTGTGTGTTAGATTGGTTTGCCAAACTTTGGGAAATTGAGAAGGATGAGTACTGGGGATATGTTACAAATGGTGGAACTGAAGGAAATTTTTATGCAATCTTAGTAGGGAGGGAACTATATCCAGATGGAGTTTTGTACACATCAAAAGAATCCCATTATTCATTGTTCAAGATAGCAAGAATAACTAGAGTGGCGTGTGTGGTAGTTGGGACTAAACCCTCAGGTGAAATTGATTATGATGAATTAAAGGCTTCACTTCTTGCACAAAAGGACAAGCCAGCAATCATCAACCTGAACCTGGGCACAACAATAAAAGGAGCTATTGATGACCTTGATCTGGTACTACAAATACTTGAGGATTGTGGCTTCACAGAAGATCGATTCTACATTCATTGTGACGCCGCTTTACTAGGAATGATGCTCCCATTCATCAACGGAGCACCAAAGATTTCTTTCAAGAAGCCTATTGGAAGTGTAAGTGTCTCAGGGCATAAATTTCTCGGATGCCCAATCCCATGTGGTGTTGTGATAACTCGTTTAAATCATGTAGACCTTCTCTCTAAAGAAGTAGAATGCATTGCTTCGAGGAATTCCACCATCTCGGGAAGTCGAGGAGGCCATGCTTCTATCTTCCTTTGGTATGCTCTCAACAAGAGAGGCTTCAATGGCCTTCAAAAAGATGTGAGTGACTGCATCGACAAGGCAATCTACCTTCGAAATTGCTTGAGGGACCATGGCATTGGAGTCATGTTGAACAAGTATAGCAATATCGTAGTATTTGAGAGGCCTCTTGATGATGAATTTACTCGTAAGTGGATGTTAGTTAACGAAGGAAATATATCACACATAGTTGTGTCGCAACATGTGACTATTGAAATTCTAAATTCATTTGTGAGGGAGTTTGTGGAGAATCGATTGATTTGGTATGAAGATAATGAAAGCAAGATAGCTCCGCATATTTCTGAGAATGTTGGTGATAAGAACTGTGCTTGTTCTTCCCAAAAGAATCTGATCTAG 1395 0.4007 MDKATLPSLSSTISKYQVLQSMVNDNKPIKEEEEAQKQKAPLENGNSIIKPTISEFSGVHTEEKLAHVIGCYVESLTHLKDRCLGYPANQDLNYEALKQLICFRLNNAGDPFIGSSYMFNSYPFELCVLDWFAKLWEIEKDEYWGYVTNGGTEGNFYAILVGRELYPDGVLYTSKESHYSLFKIARITRVACVVVGTKPSGEIDYDELKASLLAQKDKPAIINLNLGTTIKGAIDDLDLVLQILEDCGFTEDRFYIHCDAALLGMMLPFINGAPKISFKKPIGSVSVSGHKFLGCPIPCGVVITRLNHVDLLSKEVECIASRNSTISGSRGGHASIFLWYALNKRGFNGLQKDVSDCIDKAIYLRNCLRDHGIGVMLNKYSNIVVFERPLDDEFTRKWMLVNEGNISHIVVSQHVTIEILNSFVREFVENRLIWYEDNESKIAPHISENVGDKNCACSSQKNLI 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g2697 464 Gene3D Aspartate Aminotransferase, domain 1 343 431 IPR015422 GO:0003824
Mibi02g2697 464 Gene3D - 104 342 IPR015421 GO:0003824
Mibi02g2697 464 PANTHER - 22 461 - -
Mibi02g2697 464 Pfam Pyridoxal-dependent decarboxylase conserved domain 125 372 IPR002129 GO:0016830|GO:0019752|GO:0030170
Mibi02g2697 464 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 284 305 IPR021115 GO:0016831
Mibi02g2697 464 SUPERFAMILY PLP-dependent transferases 47 429 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g2697 Mibi-ChrMibi02 37224887 37227068 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g2697 226 426 Calmodulin-binding Proteins AT1G65960 26.339 4.14e-09 56.2