Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g2685 ATGTTGATGATGCAGCTTGGAGAGCCAACCACAGTCGTATCATCACCGATGGTCCCTAAGGCAGCGGCAGAAGCACCACCGCCTCCTCCGCCGCCACCGGAAGCCGCCGAGGAACCGGACGGAGGCGGCGAGATCATAATTGGGATGGATAATGATACAGCAGCAGCAACAGCAACAACTTCATCTGGTGAAGGTGACAATAATAAGATGAATAGTGGAGGAAATCGGTGGCCCCGACAAGAGACTTTGGCTTTGTTGAAGATAAGGTCTGATATGGATTCTGTGTTTCGAGATTCAACTCTTAAAGGTCCACTCTGGGAAGAAGTTTCAAGGAAGCTTGGAGAGCTTGGTTACAAGAGAAGCGCAAAGAAGTGCAAGGAGAAATTTGAGAACGTGTATAAGTACCACAAGAGAACCAAAGATAGCAGAAATGCCAAATCAGAAGGAAAAACCAAAACCTATAGGTTTTTCGATGAATTAGAAGCTTTTGAATCTCGATTCACTATCTCACATCATGCTCAACCTCAACCTCAACCTCATCATCCTCCAAAATCATTATCACATCCTCCTAATTTGCCTCCAAATACAACACTTACCACATTGCCATTCCTCTCGAGGCCTAGTGATCATTCATCAGCCACCTTCTCTTACGTCACTGGTGTCACAACCACCACCAACACCACCACAACTAACACGACTGTTCCATCTTCAAATAATCACACCACGGCGCCGAACGCGAACTTTTCGACCTCGACGTCGTCGTCCACGGACTCGGACGAGGACTTGGAAGAGAGGTACAGGAAGAAGAGAAAGTGGAAGGACTACTTCAGGAGGCTAACAAGGAGAGTTCTGGCAAGGCAAGAGGAGATGCAAAAGAGATTCTTGGATGCCGTTGATAAAAGAGAGCGAGAGCGTGTGGCTCAACAAGATGCTTGGAGGATGCAAGAAATGGCTAGAATCAACCGTGAACATGAAATCCTCGTCCAAGAAAGATCCACCGCCGCCTCCAAAGACGCTGCCATCATTGCATTCTTACAAAAATTCTCCGGCGCCTCACCACCGCCTCCTCCGGTGCCACCGGTGTCCGTGTCGGTGGTGGCGTCACAGTTTCAACAACCACCGCAACAACAACAACAACAAAGCCAGCAGTGTCACCAGATGGTGGTTATGATGCCGAGTGACAACATTAGCTATGAAAAGTTTGAAATACAGAAAATGAGTAGCAACAACGGTCACAATATCAATGGTGGTGGTGGCGGTTCATCGCGGTGGCCGACGGCGGAGGTACATGCGTTGATAAGGATGAGGACGAGTTTGGAGGCGAAGTATATGGAAAACGGTCCGAAGGCTCCATTGTGGGAGGAAATATCTAAGGAAATGAAGAAGTTGGGGTACAATAGGAATGCCAAGAGGTGCAAGGAGAAGTGGGAGAATATCAACAAGTACTTCAAGAAGATTAGAGAAAGCAACAAACAAAGGCGTGAGGATAGTAAGACTTGTCCTTACTACAATGAACTTGAAGCTTTGTACAAAGAAAAGACCAAAAACAATAATAACAATAATTTCTTCAGTAATTCGCTTGGTCACAATGTGGAGCCATTAATGGTCCAGCCTGAACAGCAATGGAGGCCTCCCACACAAGAAGAAGAAGACGATGAAGAAGAAGAAGAAGATGGAGGAAGTATTGACTTAGAAGATGAAGAAGAAGGAGGAGGTGACGGTGGCGGCGGTAACGGTGGTTCTGAGAATGATAGCTTGAAAAAGAAACTTTCTTCAGTGGACACAGTTGGATGA 1794 0.4671 MLMMQLGEPTTVVSSPMVPKAAAEAPPPPPPPPEAAEEPDGGGEIIIGMDNDTAAATATTSSGEGDNNKMNSGGNRWPRQETLALLKIRSDMDSVFRDSTLKGPLWEEVSRKLGELGYKRSAKKCKEKFENVYKYHKRTKDSRNAKSEGKTKTYRFFDELEAFESRFTISHHAQPQPQPHHPPKSLSHPPNLPPNTTLTTLPFLSRPSDHSSATFSYVTGVTTTTNTTTTNTTVPSSNNHTTAPNANFSTSTSSSTDSDEDLEERYRKKRKWKDYFRRLTRRVLARQEEMQKRFLDAVDKRERERVAQQDAWRMQEMARINREHEILVQERSTAASKDAAIIAFLQKFSGASPPPPPVPPVSVSVVASQFQQPPQQQQQQSQQCHQMVVMMPSDNISYEKFEIQKMSSNNGHNINGGGGGSSRWPTAEVHALIRMRTSLEAKYMENGPKAPLWEEISKEMKKLGYNRNAKRCKEKWENINKYFKKIRESNKQRREDSKTCPYYNELEALYKEKTKNNNNNNFFSNSLGHNVEPLMVQPEQQWRPPTQEEEDDEEEEEDGGSIDLEDEEEGGGDGGGGNGGSENDSLKKKLSSVDTVG 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g2685 597 MobiDBLite consensus disorder prediction 223 265 - -
Mibi02g2685 597 PANTHER FI21293P1 32 555 - -
Mibi02g2685 597 Gene3D - 424 485 - -
Mibi02g2685 597 Gene3D - 77 138 - -
Mibi02g2685 597 MobiDBLite consensus disorder prediction 176 190 - -
Mibi02g2685 597 FunFam Trihelix transcription factor GT-2 77 138 - -
Mibi02g2685 597 ProSiteProfiles Myb-like domain profile. 422 480 IPR001005 -
Mibi02g2685 597 SMART sant 420 482 IPR001005 -
Mibi02g2685 597 SMART sant 73 135 IPR001005 -
Mibi02g2685 597 MobiDBLite consensus disorder prediction 546 572 - -
Mibi02g2685 597 MobiDBLite consensus disorder prediction 223 256 - -
Mibi02g2685 597 MobiDBLite consensus disorder prediction 537 597 - -
Mibi02g2685 597 MobiDBLite consensus disorder prediction 1 78 - -
Mibi02g2685 597 FunFam Trihelix transcription factor GT-2 424 485 - -
Mibi02g2685 597 Pfam Myb/SANT-like DNA-binding domain 75 162 IPR044822 -
Mibi02g2685 597 Pfam Myb/SANT-like DNA-binding domain 422 509 IPR044822 -
Mibi02g2685 597 MobiDBLite consensus disorder prediction 21 37 - -
Mibi02g2685 597 CDD GT1 423 487 - -
Mibi02g2685 597 MobiDBLite consensus disorder prediction 171 200 - -
Mibi02g2685 597 CDD GT1 75 140 - -
Mibi02g2685 597 MobiDBLite consensus disorder prediction 53 78 - -
Mibi02g2685 597 ProSiteProfiles Myb-like domain profile. 69 133 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g2685 Mibi-ChrMibi02 35996548 35998953 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g2685 62 541 Trihelix Transcription Factor Family AT1G76890 48.337 1.01e-135 406
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mibi02g2685 Myb_DNA-bind_4 2.2e-20 CL0123