Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g2653 ATGTCAGACATTGATTCGTCAAAGAAAGTAGCTGATAGATATTTGAGGCGTGAAGTCCTCGGCGAAGGTACCTATGGAGTGGTATACAAAGCCATTGATACAAAGACCGGGCAGACTGTTGCAATTAAAAAAATTCGACTTGGCAAGCAGAAGGAAGGGGTCAATTTTACAGCTCTAAGAGAGATTAAACTGCTCAAAGAGCTCAAAAGTCCCAATATTATTGAGTTAATTGATGCGTTCCCACATAAAGGGAATTTGCATCTTGTGTTTGAATTCATGGAGACAGACCTTGAAGCTGTCATACGAGATCGAAACATTTTTCTTTCACCTGCTGATATAAAATCCTACCTTCAAATGACACTTAAAGGTCTTGCCTATTGCCACAAGAAATGGGTTTTGCATAGGGACATGAAGCCAAATAACTTGTTGATAGGACCCAATGGACAGCTGAAACTTGCAGATTTTGGTTTAGCAAGGATATTTGGGAGCCCAGATCGAAGGTTTACTCATCAGGTGTTTGCTCGGTGGTATAGAGCACCTGAGCTGTTATTTGGGGCCAAACAGTATGGGTCAGGGGTTGATGTTTGGGCTGCAGCCTGTATATTTGCTGAACTTCTGCTTCGTCGACCCTTTTTGCAGGGTTTAAGTGATATTGATCAATTGGGAAAGATTTTTGCTGCATTTGGGACTCCAACGCCTTCTCAGTGGGCTGATATAGTATACCTTCCTGATTATGTTGAATACCAATATGTTCCAGCTCCTCCTTTGCGTTCTTTATTCCCAATGGCAAGTGATGATGCTTTAGATTTGTTGTCAAAGATGTTTACATATGATCCTAAAGTAAGAATTTCAGTTCAGCAGGCATTAGAGCACAGGTATTTTTCCTCTGTGCCTCTGCCCACAGATCCTGATAAGCTTCCCAGACCTGCCCCAAAGAAGGATCTTAAGGCTTCTGATTCCAATCCACATGAGGGCCCAACTGTTTTATCACCTCCTAGAAAGTCTAGGAGAGTGATGCCAGGGCGTGATGGATTTGAAGGAAATGCATTACAAGGAGGTAATGTTGGTGATTACACGCAAAAGGCTGGTGATAATACAGGCAAGAGTGATCCAGCTGCAACGTCAGTAGACTTTTCTGTCTTTGGATTAAATCCTCCAAACAGGCCTACAATCAACAGTGCTGACAGATCACATCTGAAAAGAAAATTAGATCTAGAATTTCAGTATCCAGAATGA 1236 0.4199 MSDIDSSKKVADRYLRREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPNIIELIDAFPHKGNLHLVFEFMETDLEAVIRDRNIFLSPADIKSYLQMTLKGLAYCHKKWVLHRDMKPNNLLIGPNGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGAKQYGSGVDVWAAACIFAELLLRRPFLQGLSDIDQLGKIFAAFGTPTPSQWADIVYLPDYVEYQYVPAPPLRSLFPMASDDALDLLSKMFTYDPKVRISVQQALEHRYFSSVPLPTDPDKLPRPAPKKDLKASDSNPHEGPTVLSPPRKSRRVMPGRDGFEGNALQGGNVGDYTQKAGDNTGKSDPAATSVDFSVFGLNPPNRPTINSADRSHLKRKLDLEFQYPE 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g2653 411 CDD STKc_CDK7 13 307 IPR037770 GO:0005675|GO:0008353|GO:0070985
Mibi02g2653 411 Gene3D Transferase(Phosphotransferase) domain 1 95 310 - -
Mibi02g2653 411 ProSitePatterns Protein kinases ATP-binding region signature. 20 44 IPR017441 GO:0005524
Mibi02g2653 411 MobiDBLite consensus disorder prediction 306 320 - -
Mibi02g2653 411 Pfam Protein kinase domain 16 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g2653 411 ProSiteProfiles Protein kinase domain profile. 14 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g2653 411 MobiDBLite consensus disorder prediction 353 373 - -
Mibi02g2653 411 FunFam Cyclin-dependent kinase D-1 5 94 - -
Mibi02g2653 411 SMART serkin_6 14 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g2653 411 Gene3D Phosphorylase Kinase; domain 1 4 94 - -
Mibi02g2653 411 MobiDBLite consensus disorder prediction 296 397 - -
Mibi02g2653 411 SUPERFAMILY Protein kinase-like (PK-like) 10 302 IPR011009 -
Mibi02g2653 411 FunFam Putative cyclin-dependent kinase 7 95 310 - -
Mibi02g2653 411 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672|GO:0006468
Mibi02g2653 411 PANTHER CELL DIVISION PROTEIN KINASE 12 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g2653 Mibi-ChrMibi02 34973639 34977848 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g2653 5 408 Core Cell Cycle Gene Families AT1G18040 75.990 0.0 615
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CDK7 Mibi02g2653 Pkinase 1.4e-71 CL0016