Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g2600 ATGAAACTGATCTCTTTGTATTTTCTTCATCTAAAGATGAACCTAACTCTCCCCACCACCACCACCACCACCATCACCATATTCTTCCTTTCGCTGTCTCTGCTTTTCCTTTCTATTCCCTTCGTCGATTCTTACGATCCCGTTGATCTCTTTAGCATCAGCTGTGGCTCTCGTGGAAATTCTTCACTTGGAAACAGGAATTGGATAGGAGACATCGATTCAAAACTCTTGTCTTCTTCTTCTTCTTCACAAGACAAATCCATTTCTGCCCAACCAATCGATCAAATCCCTTCAAATGTTCAGGTTCCATTCACAACAGCTCGTCTTTCTCGCTCAAACTTCACCTATTCTTTTCCTGTCACTTCAGGTCAGAAATTCGTTCGCCTTTTCTTCTACCCAGCTTCATACCCAGGTTTTGATTCCTCCAATGGCTTCTTCACTGTGGAATCTAATGGGTTTACTCTCCTTAAGGACTTCAACGCTTCGCTTAATTCTCTTGCTGAAGGAAGCGAAACTTTGATCAGAGAATATTGTGTCAACGTGGATGATGGTGGTAGGCTTAATTTGACCTTCACTCCAAACTCAACAAACCCAAATTACTTCGCTTTCATTAACGGAATTGAGGTCGTGTCCATGCCTACAAATCTTTACTACACGGACAGTAAAGGGGTTCCGTTTTTGGGTGGTGGAAGCCTTTTCACAATAGGAAATGACTCTGCTTTGAAAACAGAGTATCGACTGAACGTGGGTGGAAGAGAAATCCCTCCTGATCATGACACAGGGATGTACAGATCATGGGAACAAGATGATAGTTTCGTGATGACTCAAAGTTACTTACCTGCTCAATTCGAACCTGTGAATCTGACTTACACCATGGAGCCTAATTATACAGCACCTGTTGATGTCTATTTCACAGGAAGATCAATGGGAATCAACGCTACATGGAACAAGATGAATAATCTCACTTGGGAATTCTCTATTGATTCTGGCTTTTCCTACTTGATTAGGCTTCATTTTTGCGAGCTTGATCCAAATATTAACAAGCCAGGTGATCGAGCTTTCTTCATTTACATAGCTCAACAAGTTGCTGAGGATAACGCTGATGTCCTGAAATGGACACAGCAAAGAGGTGTTCCAATTCACAAAGATTACGCTCTTTCTGTTACAGCAAATCAAGAGAAGAAGACAAATCTCTTAATCCAAATGCATCCTCTTCCAGATAGCAAAACTCTTTACAGTGATGCTTTCTTGAATGGAATTGAAATTTTCAAAATCAGTGACCCACAAAGTAAAAATCTCGCCGGACCAAACCCCGATCATCCTCCGTCATCTCCGCCGTTGCCGTCAGTTCAAAACACCACAAAAAAGAGCAATAACACGGCCGCGATAGTCGGCGCCGTAATCGGAGTTGTCGCCGGGATTGTTATACTATCTATTATTGGTGTTTTCTTCATAATCAAACGTGGGAAGAGAATTAAGGATTCAAAATCAAGTGACACGGCATCAAAGTGGGGCCCAATTTCACAATCCACGTCGAAATCGACGGTCACGACGGCCTCGTCGTCTCTGCCGTCCGATCTCTGCCGTTATTTTTCAATAGCTGAGATCAAAGCTGCCACCAACAACTTCGATGACGTGTTCATCATCGGCGTGGGAGGATTCGGCCACGTGTACAAAGGTTACATCGACGGCGGAGCAACGCCCGTGGCGATCAAACGGCTGAAACCTGATTCACAACAAGGGGCCCGCGAGTTCCAAACTGAGATTGAAATGTTGTCACAGCTTCGTCACCTTCATTTAGTTTCTCTCATTGGGTTTTGCAATGAAAACAATGAGATGATATTAGTGTACGATTATATGGCACGTGGGACCCTCCGTGATCATCTGTATAATACTGATAACCCACCGCTGACGTGGAAACAAAGGCTTCAGATTTGTATTGGAGCAGCGAGGGGGTTGCATTATTTACATGCGGGTGCGACACACACGATTATTCACCGTGATGTGAAGACCACAAACATTTTACTGGATGAGAAATGGGAGGCGAAGGTTTCGGATTTCGGGCTGTCCAAAATGGGGCCCACGGGGATGATGAAGACACACGTCAGCACAGTGGTGAAGGGTAGTATCGGGTATTTGGATCCGGAATATTATAAACGACAGCGTTTGACTGAGAAGTCTGACGTGTACTCTTTTGGTGTGGTGTTGTTTGAGGTATTATGTGCTAGGCCGGCGTTGGTCCGTACGGTGGAGAAGAAACAGGTGTCACTTGGTGATTGGGGGAAGCATTGTTACCAGAATGGGTCGTTGACTCAGATTGTGGACCCCACTTTGGCGGGAAAGATATCTCCCGAGTGTTTGAGGAAATTTGGTGAGATAGCTTCGAGTTGTTTGCTGGACGATGGGACCCACCGGCCATCTATGAACGACGTCGTATGGGGGTTGGAGTTTGTGTTGCAGCTACAGGAGAATGCTGAGCAACAGAGAAGTGAAAGTGGGAGGGAAGAGTTTGGGGGTGGAAAGAGTTCTGAGGAGAGCCATGATGATTTATTCAGTAATAGTACTGGAACGAGTCTAGGGGCATTTTCGGGATTTAACAAGAGCTATAGTGAAGTGAGCATGACAACAAGTAGTGGAGGGCATAGTTATGGGAGTAAAGAGACAGATAAGTTGATGGCAGCGAATGTGTTCTCAGAGATTGGAGAACCAAAAGCACGTTGA 2721 0.4476 MKLISLYFLHLKMNLTLPTTTTTTITIFFLSLSLLFLSIPFVDSYDPVDLFSISCGSRGNSSLGNRNWIGDIDSKLLSSSSSSQDKSISAQPIDQIPSNVQVPFTTARLSRSNFTYSFPVTSGQKFVRLFFYPASYPGFDSSNGFFTVESNGFTLLKDFNASLNSLAEGSETLIREYCVNVDDGGRLNLTFTPNSTNPNYFAFINGIEVVSMPTNLYYTDSKGVPFLGGGSLFTIGNDSALKTEYRLNVGGREIPPDHDTGMYRSWEQDDSFVMTQSYLPAQFEPVNLTYTMEPNYTAPVDVYFTGRSMGINATWNKMNNLTWEFSIDSGFSYLIRLHFCELDPNINKPGDRAFFIYIAQQVAEDNADVLKWTQQRGVPIHKDYALSVTANQEKKTNLLIQMHPLPDSKTLYSDAFLNGIEIFKISDPQSKNLAGPNPDHPPSSPPLPSVQNTTKKSNNTAAIVGAVIGVVAGIVILSIIGVFFIIKRGKRIKDSKSSDTASKWGPISQSTSKSTVTTASSSLPSDLCRYFSIAEIKAATNNFDDVFIIGVGGFGHVYKGYIDGGATPVAIKRLKPDSQQGAREFQTEIEMLSQLRHLHLVSLIGFCNENNEMILVYDYMARGTLRDHLYNTDNPPLTWKQRLQICIGAARGLHYLHAGATHTIIHRDVKTTNILLDEKWEAKVSDFGLSKMGPTGMMKTHVSTVVKGSIGYLDPEYYKRQRLTEKSDVYSFGVVLFEVLCARPALVRTVEKKQVSLGDWGKHCYQNGSLTQIVDPTLAGKISPECLRKFGEIASSCLLDDGTHRPSMNDVVWGLEFVLQLQENAEQQRSESGREEFGGGKSSEESHDDLFSNSTGTSLGAFSGFNKSYSEVSMTTSSGGHSYGSKETDKLMAANVFSEIGEPKAR 906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g2600 906 Pfam Malectin-like domain 53 425 IPR024788 -
Mibi02g2600 906 MobiDBLite consensus disorder prediction 430 454 - -
Mibi02g2600 906 FunFam FERONIA receptor-like kinase 239 426 - -
Mibi02g2600 906 Gene3D - 240 426 - -
Mibi02g2600 906 Gene3D - 50 213 - -
Mibi02g2600 906 MobiDBLite consensus disorder prediction 499 519 - -
Mibi02g2600 906 FunFam Receptor-like protein kinase FERONIA 515 619 - -
Mibi02g2600 906 Gene3D Transferase(Phosphotransferase) domain 1 620 841 - -
Mibi02g2600 906 MobiDBLite consensus disorder prediction 824 855 - -
Mibi02g2600 906 ProSitePatterns Protein kinases ATP-binding region signature. 549 572 IPR017441 GO:0005524
Mibi02g2600 906 MobiDBLite consensus disorder prediction 496 519 - -
Mibi02g2600 906 Gene3D Phosphorylase Kinase; domain 1 504 619 - -
Mibi02g2600 906 Pfam Protein tyrosine and serine/threonine kinase 549 812 IPR001245 GO:0004672|GO:0006468
Mibi02g2600 906 FunFam FERONIA receptor-like kinase 50 213 - -
Mibi02g2600 906 ProSiteProfiles Protein kinase domain profile. 543 818 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g2600 906 PANTHER OS03G0124300 PROTEIN-RELATED 26 495 - -
Mibi02g2600 906 MobiDBLite consensus disorder prediction 828 848 - -
Mibi02g2600 906 ProSitePatterns Serine/Threonine protein kinases active-site signature. 664 676 IPR008271 GO:0004672|GO:0006468
Mibi02g2600 906 SMART serkin_6 543 818 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g2600 906 CDD STKc_IRAK 549 812 - -
Mibi02g2600 906 SUPERFAMILY Protein kinase-like (PK-like) 513 816 IPR011009 -
Mibi02g2600 906 FunFam Receptor-like protein kinase FERONIA 620 836 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g2600 Mibi-ChrMibi02 33311793 33314513 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g2600 45 906 Receptor kinase-like Gene Family AT3G51550 53.281 0.0 838
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Mibi02g2600 Malectin_like 5.8e-39 CL0202