LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mibi02g2586	ATGGTGACCTTCCTGTTACTCTTCTTCTCCCAACTCATTTACACCATTACCGTAACCTCCTACAATCCTATTGAACATTTTGCCGTCAACTGTGGTAGCTCCGGCCAAGTTACGTCCAACGATCAACGGAACTGGACAGGAGATATTGGCTCCACCAAATTTTCTCTTATAGATCCCTACAAAGCAACCCAGTTCATCAAACCCCAACAACAAGTAACATTGAATCCATCAACCCCCTACGGCAGCGCACGCCTCTCTCGCTCTGAATTCTCCTATTCATTTCCTGTGAGCGTTGGCCAAAAGTTCATTCGCCTATACTTTCACTCACTTGACTACAACCCCAATTTCCTTCGCTATGATGCTTTATTCTCCGTCAAAGCAGGGCCACACACCCTTCTTAAGGATTTCAACGCTTCACTTAACGCAGATGCTGGTGCTTCACTTATTAAAGTTCCTGTTCCAGAAGGAGTTATCGTACGAGAGTACTGTGTCAACATTAACGCAGGTCAGAAGCTTAACATAACCTTCACGCCCAACCTATCTCATCCGTATGCCTATGCTTTTGTTAATGGGATTGAGGTCATCTCTATGCCCGACTTTCTTTATTACACAAACCAAAAAATCCCACAAGACAAGCAGGGGATGATTTTAGGTGGTGGGACCCAGCAGTTTACGATCCAGAACACAAGTGCTCTAGAGACTATGTATAGAACTCATGCTGGTGGAAGTGAGATCCCTCCCGAAAAGGACACAGGCATGTTTCGTTATTGGGAGCAAGATAATGACTACTTGGAGAGTGGGGAGCGCCCACACAGTGTATCAGCAGGTTTTGGTTTGAAGCCAATCTACAAAGATAATCAAAGTTATTTCGCACCTGATGATGTATACAAGACTGCTCGAAACTATGGGATGAATGAGACATCCAAGTTTAATGTGACCTGGAAATTTGAAGTTGACTTGATGTTTTATTATATGGTGAGATTGCATTTTTGTGAGTTTGATGAAAATATTGAAAAAGCTGGGGACAGAGTTTTTCAAATCTTCATAAATGCTGTTTTGGCGGAGTATGACGGGGATGTGATGTTGTGGACTCAAAATCAGAGACTAGTTCCTGTCCATAGGGACTATGCAGTGTGGATGCCGAGTGATGGAAGCTCAAAAAAGCTGAATCTTTCAATTAAGTTGCAACCACACCCAATTTTGGGAAGCATTTACAGAGATGTTTTATTGAATGGCATTGAAATTCTTAAAATAAGTGACGATAAAGACAACCTCGGAGGTGCCAATCCTGATCCACCACCCATTCCATTCAAGCCACCATCGGAGTCATCTAAGAACTCAGAAAAGTTGAAACATTTTGCTGTCATTGGGGCATGTTCAGGTTTCATTATGGTATCTCTTGTTATTTTTCTGACTTACCGGATATTGACTAGAGCTAATAAGTTCAAGGAAGGAAGTTCGTGGTGGGGAAAAAAATCAGAAGACTCGTCTAAGATAAACAAATCTCATGGGCCAACATTACCATCCACTTTGTGTCGCTACTTTTCCATGGATGAAATAAGAGCAGCCTCCAATAATTTCGATGATATTTTCATTGTGGGTGTTGGAGGGTTCGGTAATGTCTATAAAGGCTACATTGATAAAGGTACGGTCCCTGTGGCAATCAAACGGCTCAAAAAAGGTTCCCATCAAGGAATCCATGAGTTCCGAACTGAGATTGAAATGCTCTCTCAACTTCGTCACCGTCATTTAGTGTCTCTCATCGGATACTGCAATGAAGGTAACGAAATGATTCTGGTTTACGAGTTCATGGCACGTGGAAACCTCCGTGACCATATTTACGATTGTGAAAGTGAGCCGCTTTCTTGGAAGCAAAGATTGAAGATGCCACCTTTGAAACGTAACGTGGAGAAGGAAAAATCAAGTTTAGTGGAATGGGTCAGAAAATGCCATCGTGAGGGTTTGATTCATCAAACGGTGGATCCTTTACTTGTGGAAAGTATCACACCAGAGTGTTTGAAAGCATTTAGCGACATGGCACTGAAATGTTTGGTGGAAGATGGGAATGAACGACCTTCGATGAACGACGTCGTTTGGGGACTAGAGTTTGCGTTACAGCTTCAAGAAGGAACGGAGGAAGTGGGGATTGATGTGCTTGAAATTGAAGGAAAGAGCGAGGAAAGTGCTTTCTTGAGTAAAGCGACAAATAATATTGTGGAAGAAAGTAAAGTGGGTTTCACGAGCAGTGATGAATCAAAAAGCGGCAAGTTGACTGGTTCAAGCAGTGAAGATCAGTCTTTGGTTTCTTCTGGGGTGATCTTATCGGAGTTGGGTAACCCAACAGTTCGATGA	2352	0.4269	MVTFLLLFFSQLIYTITVTSYNPIEHFAVNCGSSGQVTSNDQRNWTGDIGSTKFSLIDPYKATQFIKPQQQVTLNPSTPYGSARLSRSEFSYSFPVSVGQKFIRLYFHSLDYNPNFLRYDALFSVKAGPHTLLKDFNASLNADAGASLIKVPVPEGVIVREYCVNINAGQKLNITFTPNLSHPYAYAFVNGIEVISMPDFLYYTNQKIPQDKQGMILGGGTQQFTIQNTSALETMYRTHAGGSEIPPEKDTGMFRYWEQDNDYLESGERPHSVSAGFGLKPIYKDNQSYFAPDDVYKTARNYGMNETSKFNVTWKFEVDLMFYYMVRLHFCEFDENIEKAGDRVFQIFINAVLAEYDGDVMLWTQNQRLVPVHRDYAVWMPSDGSSKKLNLSIKLQPHPILGSIYRDVLLNGIEILKISDDKDNLGGANPDPPPIPFKPPSESSKNSEKLKHFAVIGACSGFIMVSLVIFLTYRILTRANKFKEGSSWWGKKSEDSSKINKSHGPTLPSTLCRYFSMDEIRAASNNFDDIFIVGVGGFGNVYKGYIDKGTVPVAIKRLKKGSHQGIHEFRTEIEMLSQLRHRHLVSLIGYCNEGNEMILVYEFMARGNLRDHIYDCESEPLSWKQRLKMPPLKRNVEKEKSSLVEWVRKCHREGLIHQTVDPLLVESITPECLKAFSDMALKCLVEDGNERPSMNDVVWGLEFALQLQEGTEEVGIDVLEIEGKSEESAFLSKATNNIVEESKVGFTSSDESKSGKLTGSSSEDQSLVSSGVILSELGNPTVR	783

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mibi02g2586	783	FunFam	FERONIA receptor-like kinase	26	198	-	-
	Mibi02g2586	783	MobiDBLite	consensus disorder prediction	424	444	-	-
	Mibi02g2586	783	Gene3D	-	230	419	-	-
	Mibi02g2586	783	Gene3D	-	26	197	-	-
	Mibi02g2586	783	Pfam	Protein tyrosine and serine/threonine kinase	533	629	IPR001245	GO:0004672\|GO:0006468
	Mibi02g2586	783	FunFam	Receptor-like protein kinase FERONIA	499	603	-	-
	Mibi02g2586	783	SUPERFAMILY	Protein kinase-like (PK-like)	640	699	IPR011009	-
	Mibi02g2586	783	Gene3D	Transferase(Phosphotransferase) domain 1	629	707	-	-
	Mibi02g2586	783	MobiDBLite	consensus disorder prediction	744	766	-	-
	Mibi02g2586	783	FunFam	FERONIA receptor-like kinase	230	419	-	-
	Mibi02g2586	783	SUPERFAMILY	Protein kinase-like (PK-like)	501	629	IPR011009	-
	Mibi02g2586	783	ProSitePatterns	Protein kinases ATP-binding region signature.	533	556	IPR017441	GO:0005524
	Mibi02g2586	783	PANTHER	OS03G0124300 PROTEIN-RELATED	3	489	-	-
	Mibi02g2586	783	Gene3D	Transferase(Phosphotransferase) domain 1	509	628	-	-
	Mibi02g2586	783	Pfam	Malectin-like domain	29	417	IPR024788	-
	Mibi02g2586	783	ProSiteProfiles	Protein kinase domain profile.	527	783	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mibi02g2586	Mibi-ChrMibi02	33141911	33144556	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mibi02g2586	630	783	Receptor kinase-like Gene Family	AT3G51550	38.323	1.35e-25	111

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Mibi02g2586		Malectin_like	3.5e-33	CL0202