Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g2572 ATGATCAACCATCAACTAACCACCTCTTTCTTCCACTTACTCTTCTTCTTTATCCAACTCAGTTTCACTGTGCCCGTCACTTCCTACAAACCAATTGAACTTTTCGCCATCAATTGTGGTAACTCCGGCAATATTCCGTCGGTTGATCAGCGGAATTGGACCGGAGACGTTGGTTCTACTCCGTTCTCTCTCATTGACCCGCATGCCGTCTCCGTCTCCGTCAAAGTCAACGTGCCAGTCAACGTTACAGTCCCTTATGGCACCGCACGCCTCTCTCGCTCTGAATTCTCCTACTCCTTTCCGGTGACCAAGGGCCGTAAGTTTGTTCGCCTATACTTTTATCCGTATTCCTATGACCATAATTTCCTCCGCTCGGACTCTCTCTTCTCTGTCGAAGCAGGATCTTTCACTCTTCTTAAGGACTTTAATGCTTCACTTGCTGCCCATGACGCTGCCCAAAAAACCATTTCACGAGAGTTTTGTGTCAATGTTGAGCCGGGTCAGACGCTAATGGTAACCTTCTTGCCTAATCTATCTCATTCAAATGCCTATGCTTTCGTCAATGGGATCGAGGTTGTCTCTATGCCTTCCAATCTTTATCGCACCAGCCTAGACGGTCTGCAGCGTATCATACTAAATGATGGTCCGCAATTTCCTGGTGAAAGCAACAGTTTTCTTGAGTCCATGTACAGAATCAACGTTGGTGGGAGTCAGATTCCTCCCAATGATGATACTGGCATGTTTCGTATGTGGGACCAGGATGTTCCGTACTTGGAGATAGAGCAGTCACACAGTGTATCATCAGCAATTGGTTTAGCTCTAAACCACGGGGATCATCAAGATTACTTCGCACCTGATGAAGTGTATCTGACTGCTAGAAATTACGGGATGAATGAAACGTCCCAAGTAAATTTGACTTGGGAGTTTCATGTGGACTCTAATTTTTTTTATTTGGTGAGATTACATTTCTGTGAGTTTGACCAATCAGTTAAAAAAATTGGAGACAGAGTTTTTCAGATCTTTATAGATGATCATTTGGTGGAGCTTTATGCTGATGTGCTACTATGGAGTGGCAATCTCCTGGTTCCCGTCCATAGAGACTACGCTGTGTGGATGCAAAATAAAGGAGGAAGCGTGCAGAGGTTGAATCTTTCGATAAAGTTGCGACCACTTCCAATTATTACAAGAAGCACACGTAATAGCACTTACAGAGATGTGTTATTGAATGGCGTTGAAATTTTCAAAATCAGCGACAATCCACGTTCATCTCCCTCATCACTGCCATCATCCTCACCGCAAAAGAATGCGGCAAGAGTAATTTCCATCGCTGTTGGGGCAGCTTTAGGCTTCATTGTGCTATCCCTTATTGCTAGCCTAATTTACTGGAGACAAAAAACAGTAGCCAAGTCTAAAGCAAGCAAAACCCCAGGAACTTCATTTGTTCCATCAGATTTGTGTCGCTGCTTTTCAATAAAAGAGATAAGAGCAGCCACTAATAATTTCAACGATACATTCATTGTAGGTGTTGGAGGGTTTGGTAATGTGTACAAAGGTTACATAGAAAATGGTACCATTCCTGTGGCAATAAAAAGGCTCAAACAAGGTTCACAACAAGGGCTTCGCGAGTTTGAAACTGAGATTGAAATGCTCTCTCAACTTCGTCACCATCATTTAGTGTCTCTTATTGGTTTCTGCACAACTAGCAAAGAGATGATCCTCGTGTACGAGTTCATGGCTCGTGGGTCCCTACGTGATCATCTCTACGATTCTGATCAGCCCCCACTTTCTTGGCATCAAAGGCTGGAGATTTGTCTGGGTGCAGCACGAGGATTGCATTATTTACACACAGGTGCAAAGCATGCTATAATCCACCGTGACATCAAGTCCACAAACATCTTGATCGACGAGAATTGGATGGCCAAGATTTCAGATTTCGGACTCTCCAAAATGGGACCATCAGGAATCACAAGATCGAACATTAACATAAGCACCTTAGTGAAAGGAAGCGTTGGATATTTGGATCCAGAATACTACACGCGTCACAAATTGACTGACAAGTCAGATGTGTACTCATTTGGAGTGGTCCTTCTAGAGGTATTGTGTGGGAGGCCTCCAATTCTACGTGCGGTTGAAAGGCAACAACAAAACCTTGTAGAGTGGTTTCGAAGATGTGTTGATGAGAATGAGATTTATGAGACGGTGGATCCAATTATTAGGGAAAGTATAACGCCACAGTGCTTAGACGCTTACACTGAGATTGTATTGCAATGCTTAGCTGATGATGGGAATGAACGGCCATCAATAGGCGATGTGATGTTGGGCCTTGAGTCTGTGACGGAGACGCTCAACAAAGAAGATAAGATGAATCTCGCAGGGACTCTAGATGAAGAGATTACTTGTGAAGAAGGAGCAGTATTCAATGGGTAA 2427 0.438 MINHQLTTSFFHLLFFFIQLSFTVPVTSYKPIELFAINCGNSGNIPSVDQRNWTGDVGSTPFSLIDPHAVSVSVKVNVPVNVTVPYGTARLSRSEFSYSFPVTKGRKFVRLYFYPYSYDHNFLRSDSLFSVEAGSFTLLKDFNASLAAHDAAQKTISREFCVNVEPGQTLMVTFLPNLSHSNAYAFVNGIEVVSMPSNLYRTSLDGLQRIILNDGPQFPGESNSFLESMYRINVGGSQIPPNDDTGMFRMWDQDVPYLEIEQSHSVSSAIGLALNHGDHQDYFAPDEVYLTARNYGMNETSQVNLTWEFHVDSNFFYLVRLHFCEFDQSVKKIGDRVFQIFIDDHLVELYADVLLWSGNLLVPVHRDYAVWMQNKGGSVQRLNLSIKLRPLPIITRSTRNSTYRDVLLNGVEIFKISDNPRSSPSSLPSSSPQKNAARVISIAVGAALGFIVLSLIASLIYWRQKTVAKSKASKTPGTSFVPSDLCRCFSIKEIRAATNNFNDTFIVGVGGFGNVYKGYIENGTIPVAIKRLKQGSQQGLREFETEIEMLSQLRHHHLVSLIGFCTTSKEMILVYEFMARGSLRDHLYDSDQPPLSWHQRLEICLGAARGLHYLHTGAKHAIIHRDIKSTNILIDENWMAKISDFGLSKMGPSGITRSNINISTLVKGSVGYLDPEYYTRHKLTDKSDVYSFGVVLLEVLCGRPPILRAVERQQQNLVEWFRRCVDENEIYETVDPIIRESITPQCLDAYTEIVLQCLADDGNERPSIGDVMLGLESVTETLNKEDKMNLAGTLDEEITCEEGAVFNG 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g2572 808 ProSitePatterns Serine/Threonine protein kinases active-site signature. 622 634 IPR008271 GO:0004672|GO:0006468
Mibi02g2572 808 Gene3D Transferase(Phosphotransferase) domain 1 578 798 - -
Mibi02g2572 808 FunFam receptor-like protein kinase FERONIA 463 577 - -
Mibi02g2572 808 ProSiteProfiles Protein kinase domain profile. 501 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g2572 808 Gene3D Phosphorylase Kinase; domain 1 462 577 - -
Mibi02g2572 808 Pfam Protein tyrosine and serine/threonine kinase 507 771 IPR001245 GO:0004672|GO:0006468
Mibi02g2572 808 Gene3D - 33 196 - -
Mibi02g2572 808 Gene3D - 226 415 - -
Mibi02g2572 808 PANTHER OS03G0124300 PROTEIN-RELATED 10 470 - -
Mibi02g2572 808 FunFam Receptor-like protein kinase FERONIA 578 796 - -
Mibi02g2572 808 CDD STKc_IRAK 507 771 - -
Mibi02g2572 808 FunFam FERONIA receptor-like kinase 34 196 - -
Mibi02g2572 808 SUPERFAMILY Protein kinase-like (PK-like) 476 773 IPR011009 -
Mibi02g2572 808 Pfam Malectin-like domain 37 416 IPR024788 -
Mibi02g2572 808 SMART serkin_6 501 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g2572 808 FunFam FERONIA receptor-like kinase 224 417 - -
Mibi02g2572 808 ProSitePatterns Protein kinases ATP-binding region signature. 507 530 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g2572 Mibi-ChrMibi02 32581362 32583788 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g2572 18 803 Receptor kinase-like Gene Family AT3G51550 43.757 0.0 635
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Mibi02g2572 Malectin_like 1.8e-40 CL0202