Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g2571 ATGAGGGAGCCTCAAACCGTTGTCCCCAGGATGACAATCGCCGTTATGTTCTTCCCGTTATTATTTACCGTTATAGTCACCTCCTACCGTCCTGTTGAGCATTTTGCAGTCAACTGTGGTAGCTCCAGTAATGTTCTGTCCCACGATCAACGGAAGTGGACAGGTGATTTTGGCAACAATCTAGTCTCTCTTATAGATCCGAACAAAGCAACCCAGTCCATCAAACCCGACGTACAAATTGGATTCAATATGTCAATCCCCTATGATACTGCAATCCACTCTCGCTCCGAATTTAATTACTCTGTTCCGCTGACCGCCGGCCAAAAGTTCATTCGCCTCTACTTCTACGCATCCTCCTACGGCTCCTACTTCCTTCGCTCCGATGCTATCTTCTCCGTCAAAGCTGGGCCACACACCCTTCTTAAGGACTTCAATCCTTCACTTAACGCTGACGCTGGAATTTCACCCAACTTTGCTCAACCAGATGGAGCCATTGTACGAGAGTACATCGTCAACGTTGACTCAAGTCTAAGGCTTGACATAACCTTCACGCCCAACCCATCTCATCGGAACGCCTATGCTTTTGTGAATGGGATTGAGATCTTCTCTATGCCTTCCTTCCTTTATTACACAAACCCACAAAATCTGCAAGCGATGATGCTAGATGGTGGGACCCAGCAGTTTCCGGTCATGAACAGAAGTGCTCTCGAGACTCTGTATAGAATTGATGTCGGTGGAAGGCAGATCCCTTCCAATGAAGACACAGGCATGTTTCGTTATTGGGATCAGGATAATGACTACTTGGAGAGCGGGGAGCGAACATATAGTGTATCATCTGGTTTTGGTTTGAAGCCAATATACAAAGATGGTCAAAATTATTTTGCTCCTGATGATGTATACAAGACTGCTCGAAACTACGGGATGAATGAAAAATCCAGATTTAATGTCACTTGGGAATTTGAGGTGGATTCAGTGTTTTATTATATGGTGAGATTGCATTTCTGTGAGTTTGATGAACATATTGAAAAGGTTGGCGATAGAGTTTTTCAGATTTTCATAAATGATGCTTTGGTGGAGCCTGTTGCCGATGTGATGATTTGGACTCAAAAAATATTGGTTCCTGTCCATAGGGACTATGCTGTGTCGATGCCGAGGGATGGAAAGAAGCTAAATCTTTCTATCAAGTTGCAACCACACCCAACTGCAAGAAGCACTTACAGAGACGTTTTATTGAATGGTATTGAAATTCTTAAAATAAGTGATTTCAATGACAATCTTGGGGGTCCAAATCCAGATCCACTTCAATCTCCACAACAGTCATCCACGCCATCCTACAATTCATCTAAGAACAGAAACAAAGCAAAGGTGATTTCCATTATCATTGGGGCAACGACAAGCTTCATTGTACTGTCTCTTATTATTCTGTTCATTTTCCGGCGATTCATTAGATCTCTGGGGTGGGGAGAAAAATCAGAATACTCATCTACGAAAAACAAATCTCACAGCTCATCACTGCCATCCGATCTGTGCCGATACTTTTCAATAGATGAGATAAGAACAGCTACTAGTAATTTCGATGATATTTTTATTGTGGGCGTTGGAGGGTTTGGTAATGTCTATAAAGGCTACATTGACAAAGGTACGGTTCCTGTGGCAATCAAAAGGCTCAAACAAGGTTCACAGCAAGGGCTAAAAGAGTTCCAAACTGAGATTGAAATGCTCTCTCAACTTCGTCACCATCATTTGGTATCTCTCATTGGTTACTGCAATGATGACAACGAGATGATCCTTGTCTACGAGTTCTTGGCTCGTGGGACGTTCCGTGAGCATCTTTATGATTCTGAAAACCAACCAATTTCTTGGAATCAAAGACTAGAAATTTGCCTAGGTGCTGCGCGAGAGGCATTATGTGGGAGGCCTCCTATTCTCCGTGCTGTGGAGAGGGAGCGACAAAACCTTGTAGAGTGGTTTCGAAGAAGTGCCAATGAGAATGAGGTTTACGAAACTGTGGATCCAATCTTGAGGGAAAGTATGATACCAGAGTGCTTAAAGGCATACACTGAGATTGCATTGAAATGCTTAGCCAATGATGGGAATGAACGGCCATCCATGGGTGATGTGATGTTGGGCCTTGGGTGA 2139 0.4348 MREPQTVVPRMTIAVMFFPLLFTVIVTSYRPVEHFAVNCGSSSNVLSHDQRKWTGDFGNNLVSLIDPNKATQSIKPDVQIGFNMSIPYDTAIHSRSEFNYSVPLTAGQKFIRLYFYASSYGSYFLRSDAIFSVKAGPHTLLKDFNPSLNADAGISPNFAQPDGAIVREYIVNVDSSLRLDITFTPNPSHRNAYAFVNGIEIFSMPSFLYYTNPQNLQAMMLDGGTQQFPVMNRSALETLYRIDVGGRQIPSNEDTGMFRYWDQDNDYLESGERTYSVSSGFGLKPIYKDGQNYFAPDDVYKTARNYGMNEKSRFNVTWEFEVDSVFYYMVRLHFCEFDEHIEKVGDRVFQIFINDALVEPVADVMIWTQKILVPVHRDYAVSMPRDGKKLNLSIKLQPHPTARSTYRDVLLNGIEILKISDFNDNLGGPNPDPLQSPQQSSTPSYNSSKNRNKAKVISIIIGATTSFIVLSLIILFIFRRFIRSLGWGEKSEYSSTKNKSHSSSLPSDLCRYFSIDEIRTATSNFDDIFIVGVGGFGNVYKGYIDKGTVPVAIKRLKQGSQQGLKEFQTEIEMLSQLRHHHLVSLIGYCNDDNEMILVYEFLARGTFREHLYDSENQPISWNQRLEICLGAAREALCGRPPILRAVERERQNLVEWFRRSANENEVYETVDPILRESMIPECLKAYTEIALKCLANDGNERPSMGDVMLGLG 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g2571 712 ProSitePatterns Protein kinases ATP-binding region signature. 531 554 IPR017441 GO:0005524
Mibi02g2571 712 Gene3D - 34 204 - -
Mibi02g2571 712 Gene3D - 234 420 - -
Mibi02g2571 712 MobiDBLite consensus disorder prediction 429 449 - -
Mibi02g2571 712 SUPERFAMILY Protein kinase-like (PK-like) 493 708 IPR011009 -
Mibi02g2571 712 Pfam Malectin-like domain 37 418 IPR024788 -
Mibi02g2571 712 FunFam FERONIA receptor-like kinase 34 205 - -
Mibi02g2571 712 Gene3D Transferase(Phosphotransferase) domain 1 490 634 - -
Mibi02g2571 712 Pfam Protein tyrosine and serine/threonine kinase 531 633 IPR001245 GO:0004672|GO:0006468
Mibi02g2571 712 FunFam Receptor-like protein kinase FERONIA 497 601 - -
Mibi02g2571 712 Gene3D Transferase(Phosphotransferase) domain 1 635 712 - -
Mibi02g2571 712 PANTHER OS03G0124300 PROTEIN-RELATED 16 489 - -
Mibi02g2571 712 ProSiteProfiles Protein kinase domain profile. 525 712 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g2571 712 FunFam FERONIA receptor-like kinase 234 420 - -
Mibi02g2571 712 MobiDBLite consensus disorder prediction 428 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g2571 Mibi-ChrMibi02 32571271 32573673 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g2571 634 711 Receptor kinase-like Gene Family AT3G51550 41.026 4.56e-14 74.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Mibi02g2571 Malectin_like 1.6e-33 CL0202